RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 EPN3Q9H201 632 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 SYTL2Q9HCH5 934 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 TREX1Q9NSU2 369 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 SERTAD3Q9UJW9 196 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 SNX7Q9UNH6 387 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 TP53TG5Q9Y2B4 290 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 TDRKHQ9Y2W6 561 aaKnown RBP14.67□□□□□ -0.06
VARS-223ENST00000474643 PCDHGA6Q9Y5G7 932 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 CTAGE15A4D2H0 777 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 C9J4A7 227 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 NDC80O14777 642 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 LIN7AO14910 233 aaPredicted RBP14.66□□□□□ -0.06
VARS-223ENST00000474643 CTAGE8P0CG41 777 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 PTPN4P29074 926 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 CASRP41180 1078 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 RPS18P62269 152 aaKnown RBP14.66□□□□□ -0.06
VARS-223ENST00000474643 KLRB1Q12918 225 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 THOC5Q13769 683 aaKnown RBP14.66□□□□□ -0.06
VARS-223ENST00000474643 BBS9Q3SYG4 887 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 GLE1Q53GS7 698 aaKnown RBP14.66□□□□□ -0.06
VARS-223ENST00000474643 ARMC3Q5W041 872 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 PACS1Q6VY07 963 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 ASB18Q6ZVZ8 466 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 SYVN1Q86TM6 617 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 LDB1Q86U70 411 aaPredicted RBP14.66□□□□□ -0.06
VARS-223ENST00000474643 CTAGE6Q86UF2 777 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 CTAGE4Q8IX94 777 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 PHC3Q8NDX5 983 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 OR52E1Q8NGJ3 308 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 THAP4Q8WY91 577 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 ZNF501Q96CX3 271 aaPredicted RBP14.66□□□□□ -0.06
VARS-223ENST00000474643 SNF8Q96H20 258 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 KLHL25Q9H0H3 589 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 ACTR5Q9H9F9 607 aaPredicted RBP14.66□□□□□ -0.06
VARS-223ENST00000474643 ACSS2Q9NR19 701 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 FARSAQ9Y285 508 aaKnown RBP14.66□□□□□ -0.06
VARS-223ENST00000474643 ASF1AQ9Y294 204 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 BTRCQ9Y297 605 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 MYO18BQ8IUG5 2567 aa14.66□□□□□ -0.06
VARS-223ENST00000474643 FAM237BA0A1B0GVD1 139 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 FAM187AA6NFU0 413 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 GOLGA8KD6RF30 607 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 E7EQ34 232 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 GOLGA8TH3BQL2 631 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 SMAPO00193 183 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 BTN3A1O00481 513 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 SGTAO43765 313 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 OR1I1O60431 355 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 PDHA2P29803 388 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 PRDX3P30048 256 aaKnown RBP14.65□□□□□ -0.06
VARS-223ENST00000474643 SHMT2P34897 504 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 PGDP52209 483 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 ITGA8P53708 1063 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 PMS2P54278 862 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 MRPS25P82663 173 aaKnown RBP14.65□□□□□ -0.06
VARS-223ENST00000474643 CALCOCO2Q13137 446 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 SEMA3AQ14563 771 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 MORF4L2Q15014 288 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 ANKRD20A4Q4UJ75 823 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 PTRHD1Q6GMV3 140 aaKnown RBP14.65□□□□□ -0.06
VARS-223ENST00000474643 KIAA0930Q6ICG6 404 aaPredicted RBP14.65□□□□□ -0.06
VARS-223ENST00000474643 TMEM135Q86UB9 458 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 PDIK1LQ8N165 341 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 MMGT1Q8N4V1 131 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 GSDMBQ8TAX9 411 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 SGSM3Q96HU1 749 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 PPM1MQ96MI6 270 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 CHST8Q9H2A9 424 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 OR52A5Q9H2C5 316 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 TFB2MQ9H5Q4 396 aaKnown RBP14.65□□□□□ -0.06
VARS-223ENST00000474643 XKR8Q9H6D3 395 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 LATS2Q9NRM7 1088 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 ACTR10Q9NZ32 417 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 MARCH4Q9P2E8 410 aaPredicted RBP14.65□□□□□ -0.06
VARS-223ENST00000474643 POLG2Q9UHN1 485 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 PRSS21Q9Y6M0 314 aa14.65□□□□□ -0.06
VARS-223ENST00000474643 ARGFXA6NJG6 315 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 PRMT5O14744 637 aaPredicted RBP14.64□□□□□ -0.07
VARS-223ENST00000474643 RECKO95980 971 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 FURINP09958 794 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 AGXTP21549 392 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 CSE1LP55060 971 aaKnown RBP14.64□□□□□ -0.07
VARS-223ENST00000474643 ITGA1P56199 1179 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 PLOD1Q02809 727 aaPredicted RBP14.64□□□□□ -0.07
VARS-223ENST00000474643 DHX9Q08211 1270 aaKnown RBP14.64□□□□□ -0.07
VARS-223ENST00000474643 UGT8Q16880 541 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 TCTN3Q6NUS6 607 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 ATCAYQ86WG3 371 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 BBOF1Q8ND07 529 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 TRIM56Q9BRZ2 755 aaKnown RBP14.64□□□□□ -0.07
VARS-223ENST00000474643 DPH5Q9H2P9 285 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 C20orf96Q9NUD7 363 aaPredicted RBP14.64□□□□□ -0.07
VARS-223ENST00000474643 GPN3Q9UHW5 284 aaPredicted RBP14.64□□□□□ -0.07
VARS-223ENST00000474643 GNPTGQ9UJJ9 305 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 TLK1Q9UKI8 766 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 PADI2Q9Y2J8 665 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 SNX24Q9Y343 169 aa14.64□□□□□ -0.07
VARS-223ENST00000474643 UTP11Q9Y3A2 253 aaKnown RBP14.64□□□□□ -0.07
VARS-223ENST00000474643 MEN1O00255 615 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms