RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CLMPQ9H6B4 373 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ACTR8Q9H981 624 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 NANOGQ9H9S0 305 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 IL1RL2Q9HB29 575 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 LRTM1Q9HBL6 345 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 INTS7Q9NVH2 962 aaKnown RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 C1orf109Q9NX04 203 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 GDE1Q9NZC3 331 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 DEC1Q9P2X7 70 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 SNX6Q9UNH7 406 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ITM2BQ9Y287 266 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 YBX2Q9Y2T7 364 aaKnown RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 SNX13Q9Y5W8 968 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 TRBV5-3A0A0A0MS03 114 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 TMEM202A6NGA9 273 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 OTOL1A6NHN0 477 aaPredicted RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 VGLL3A8MV65 326 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 ARHGEF33A8MVX0 844 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 KPNA3O00505 521 aaPredicted RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 FFAR3O14843 346 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 ARPC2O15144 300 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 GPR42O15529 346 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 TSPAN6O43657 245 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 RNASEH1O60930 286 aaKnown RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 PDYNP01213 254 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 UMPSP11172 480 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 PRPS2P11908 318 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 BMP2P12643 396 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 SLC2A4P14672 509 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 JUPP14923 745 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 HOXB9P17482 250 aaPredicted RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 ARL1P40616 181 aaPredicted RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 OPRD1P41143 372 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 EIF2DP41214 584 aaKnown RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 CCR3P51677 355 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 RPS14P62263 151 aaKnown RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 HMGCS1Q01581 520 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 LIPEQ05469 1076 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 FCHO2Q0JRZ9 810 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 CSTF3Q12996 717 aaKnown RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 MED21Q13503 144 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 ZNF234Q14588 700 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 GRIN2CQ14957 1233 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 IMPG1Q17R60 797 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 LRRC36Q1X8D7 754 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 RABL3Q5HYI8 236 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 C9orf50Q5SZB4 431 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 OR52E8Q6IFG1 317 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 TMEM154Q6P9G4 183 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 TMC5Q6UXY8 1006 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 CYP2R1Q6VVX0 501 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 TMEM184AQ6ZMB5 413 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 GPR149Q86SP6 731 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 PROSER1Q86XN7 944 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 FAM9CQ8IZT9 166 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 ZNF366Q8N895 744 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 OR56A3Q8NH54 315 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 DNAJB8Q8NHS0 232 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 DNAJB14Q8TBM8 379 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 WDR20Q8TBZ3 569 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 CANT1Q8WVQ1 401 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 ATL1Q8WXF7 558 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 LRTOMTQ8WZ04 291 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 GTF2H4Q92759 462 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 CMTM7Q96FZ5 175 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 PPP1R16AQ96I34 528 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 METTL2AQ96IZ6 378 aaKnown RBP9.56□□□□□ -0.88
USP39-214ENST00000474572 ZNF597Q96LX8 424 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 CCDC138Q96M89 665 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 CGREF1Q99674 301 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 CCM2Q9BSQ5 444 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 VCXQ9H320 206 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 GULP1Q9UBP9 304 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 MAN2B2Q9Y2E5 1009 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 TMED5Q9Y3A6 229 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 CKAP5Q14008 2032 aa9.56□□□□□ -0.88
USP39-214ENST00000474572 C17orf113A0A1B0GUU1 675 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 DHRS12A0PJE2 317 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 PABPN1LA6NDY0 278 aaKnown RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 OR2AG2A6NM03 316 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ZNF839A8K0R7 811 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 HNRNPRO43390 633 aaKnown RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 RECQL5O94762 991 aaPredicted RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 CATP04040 527 aaKnown RBP9.55□□□□□ -0.88
USP39-214ENST00000474572 IL6P05231 212 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 BCKDHAP12694 445 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 C6P13671 934 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ADRB3P13945 408 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 HRH2P25021 359 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 GRIA3P42263 894 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 CASP2P42575 452 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 NRIP1P48552 1158 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 METAP1P53582 386 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 CLDN8P56748 225 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 C21orf58P58505 322 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 FOLH1Q04609 750 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ENPP2Q13822 863 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 INPP5AQ14642 412 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 PTGR1Q14914 329 aa9.55□□□□□ -0.88
USP39-214ENST00000474572 ACOX1Q15067 660 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms