RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 SYTL1Q8IYJ3 562 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 DNAJC22Q8N4W6 341 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 ENDOVQ8N8Q3 282 aaKnown RBP17.92■□□□□ 0.46
COL7A1-209ENST00000474432 MAIP1Q8WWC4 291 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 ASZ1Q8WWH4 475 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 MFSD3Q96ES6 412 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 TCTN2Q96GX1 697 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 NLNQ9BYT8 704 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 SPRTNQ9H040 489 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-209ENST00000474432 SYBUQ9NX95 663 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 SERTAD3Q9UJW9 196 aa17.92■□□□□ 0.46
COL7A1-209ENST00000474432 A0A0J9YY10 115 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 CYP2A7P20853 494 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 MAGEA6P43360 314 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 TTPAP49638 278 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 KCNJ11Q14654 390 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 SLC5A12Q1EHB4 618 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 DEFB110Q30KQ9 67 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 AARS2Q5JTZ9 985 aaKnown RBP17.91■□□□□ 0.46
COL7A1-209ENST00000474432 LRRC8BQ6P9F7 803 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 THAP4Q8WY91 577 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 SEC14L1Q92503 715 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 BIRC8Q96P09 236 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 IL17FQ96PD4 163 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 MRM3Q9HC36 420 aaKnown RBP17.91■□□□□ 0.46
COL7A1-209ENST00000474432 MLXIPLQ9NP71 852 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 BFARQ9NZS9 450 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 CIDEBQ9UHD4 219 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 TCFL5Q9UL49 500 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 HECTD1Q9ULT8 2610 aa17.91■□□□□ 0.46
COL7A1-209ENST00000474432 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-209ENST00000474432 E7EQ34 232 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 MKRN2OSH3BPM6 223 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 PRICKLE3O43900 615 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-209ENST00000474432 CBSLP0DN79 551 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 RPS3P23396 243 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL7A1-209ENST00000474432 CBSP35520 551 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 GCGRP47871 477 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 RAB28P51157 221 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 CDK16Q00536 496 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 CHAF1BQ13112 559 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 KIR2DS3Q14952 304 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 TRIP13Q15645 432 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-209ENST00000474432 CTSL3PQ5NE16 218 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 ANKRD22Q5VYY1 191 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 UNC5DQ6UXZ4 953 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 GSTA5Q7RTV2 222 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 TMEM151BQ8IW70 566 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 MPP5Q8N3R9 675 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 RASGEF1CQ8N431 466 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 TRIM56Q9BRZ2 755 aaKnown RBP17.9■□□□□ 0.46
COL7A1-209ENST00000474432 ANAPC5Q9UJX4 755 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 TTC7AQ9ULT0 858 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-209ENST00000474432 SOX13Q9UN79 622 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 KLHL20Q9Y2M5 609 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 NEU2Q9Y3R4 380 aa17.9■□□□□ 0.46
COL7A1-209ENST00000474432 ANKRD12Q6UB98 2062 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 PTPN13Q12923 2485 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 RELNP78509 3460 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 ISM1B1AKI9 464 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 AVILO75366 819 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 VAPBO95292 243 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 APOA4P06727 396 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 CD9P21926 228 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 PPARGP37231 505 aaPredicted RBP17.89■□□□□ 0.45
COL7A1-209ENST00000474432 PTGIRP43119 386 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 FOXK1P85037 733 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 NCF4Q15080 339 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 TYSND1Q2T9J0 566 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 CCSMST1Q4G0I0 132 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 CAND1Q86VP6 1230 aaKnown RBP17.89■□□□□ 0.45
COL7A1-209ENST00000474432 DCUN1D3Q8IWE4 304 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 C2orf73Q8N5S3 287 aaPredicted RBP17.89■□□□□ 0.45
COL7A1-209ENST00000474432 CFAP61Q8NHU2 1237 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 LPGAT1Q92604 370 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 MS4A14Q96JA4 679 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 GBP5Q96PP8 586 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 HOMER3Q9NSC5 361 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 NFS1Q9Y697 457 aa17.89■□□□□ 0.45
COL7A1-209ENST00000474432 KRT87PA6NCN2 255 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 ARGFXA6NJG6 315 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 GOLGA8KD6RF30 607 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 F8W8V4 182 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 GOLGA8TH3BQL2 631 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 AP3B1O00203 1094 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 MAP3K7O43318 606 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 CNOT3O75175 753 aaKnown RBP17.88■□□□□ 0.45
COL7A1-209ENST00000474432 KLF7O75840 302 aaPredicted RBP17.88■□□□□ 0.45
COL7A1-209ENST00000474432 OR2B3O76000 313 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 TMEM63AO94886 807 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 MAGP20916 626 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 KLRB1Q12918 225 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 GBX1Q14549 363 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 IGFBP7Q16270 282 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 PTRHD1Q6GMV3 140 aaKnown RBP17.88■□□□□ 0.45
COL7A1-209ENST00000474432 RHBDD2Q6NTF9 364 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 ASB18Q6ZVZ8 466 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 LRRC6Q86X45 466 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 ZBTB2Q8N680 514 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 OR2L8Q8NGY9 312 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms