RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 B4GALT7Q9UBV7 327 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 MUTYHQ9UIF7 546 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 PLXNA1Q9UIW2 1896 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 RIPOR2Q9Y4F9 1068 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 PCDHGB3Q9Y5G1 929 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 MYO15AQ9UKN7 3530 aa1.53□□□□□ -2.17
CCDC39-203ENST00000473854 ZNF638Q14966 1978 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 PDCD11Q14690 1871 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 DMDP11532 3685 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 SIP14410 1827 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 RTL9Q8NET4 1388 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 AFF2P51816 1311 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 TTC41PQ6P2S7 1318 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 CCDC171Q6TFL3 1326 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 SH3TC1Q8TE82 1336 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 CDHR2Q9BYE9 1310 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 VWA3AA6NCI4 1184 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 B9A039 149 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 CSPG5O95196 566 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 DDX58O95786 925 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 HEXAP06865 529 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 GALTP07902 379 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 HSPA1LP34931 641 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 HSPA4P34932 840 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 HALP42357 657 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 CRKLP46109 303 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 EIF5P55010 431 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 PAX8Q06710 450 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 TFCP2Q12800 502 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 CUL4AQ13619 759 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 PRKG1Q13976 671 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 BECN1Q14457 450 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 TAF5Q15542 800 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 DECR1Q16698 335 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 HIST2H2ACQ16777 129 aaPredicted RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 DUOXA1Q1HG43 343 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 GRAMD1BQ3KR37 738 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 ADCK5Q3MIX3 580 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 ANO1Q5XXA6 986 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 STOX1Q6ZVD7 989 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 ADCK1Q86TW2 530 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 MOGAT3Q86VF5 341 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 HSCBQ8IWL3 235 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 NKAPQ8N5F7 415 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 TMEM178AQ8NBL3 297 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 CCDC191Q8NCU4 936 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 RBM15BQ8NDT2 890 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 HUS1BQ8NHY5 278 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 SPPL3Q8TCT6 385 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 NOC3LQ8WTT2 800 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 RUFY2Q8WXA3 655 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 TBC1D20Q96BZ9 403 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 ARSGQ96EG1 525 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 B3GALT6Q96L58 329 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 SEC62Q99442 399 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 UPF3BQ9BZI7 483 aaKnown RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 BOLA2Q9H3K6 86 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 ITM2CQ9NQX7 267 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 CWC25Q9NXE8 425 aaPredicted RBP1.52□□□□□ -2.17
CCDC39-203ENST00000473854 FEM1BQ9UK73 627 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 RABGAP1Q9Y3P9 1069 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 CEP290O15078 2479 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 EYSQ5T1H1 3165 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 REV3LO60673 3130 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 ZSWIM8A7E2V4 1837 aa1.52□□□□□ -2.17
CCDC39-203ENST00000473854 C5orf42Q9H799 3197 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 SZT2Q5T011 3432 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 XIRP2A4UGR9 3374 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 CITO14578 2027 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 IGKV6-21A0A0C4DH24 114 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 IGHV4-61A0A0C4DH41 118 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 A0A1B0GUL7 405 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 C15orf62A8K5M9 175 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 SNAP23O00161 211 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PLK4O00444 970 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 IFRD1O00458 451 aaPredicted RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 TPD52L2O43399 206 aaKnown RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 TACC1O75410 805 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 CIAO1O76071 339 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 HPRP00739 348 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 IGHV4-59P01825 116 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 TFP02787 698 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PCCAP05165 728 aaPredicted RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 RBMS1P29558 406 aaKnown RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 DEKP35659 375 aaKnown RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 GRK6P43250 576 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 GSCP56915 257 aaPredicted RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 COG7P83436 770 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 NEXNQ0ZGT2 675 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 G3BP1Q13283 466 aaKnown RBP eCLIP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 NFATC2Q13469 925 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 NAE1Q13564 534 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 FASTKD3Q14CZ7 662 aaKnown RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PDCD2Q16342 344 aaPredicted RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PNLIPRP3Q17RR3 467 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 HLA-BQ31612 363 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 HSP90AB4PQ58FF6 505 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 SUSD4Q5VX71 490 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 C18orf63Q68DL7 685 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 HIST2H2BDQ6DRA6 164 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms