RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CAPSQ13938 189 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ZNF268Q14587 947 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 KYNUQ16719 465 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 DUOXA1Q1HG43 343 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 RUSC1-AS1Q66K80 236 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 KIAA0895LQ68EN5 471 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 KRT39Q6A163 491 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ADALQ6DHV7 355 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 G2E3Q7L622 706 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 HIST3H2AQ7L7L0 130 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 CCDC186Q7Z3E2 898 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ADCK2Q7Z695 626 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 AMIGO2Q86SJ2 522 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 METTL23Q86XA0 190 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 RFX6Q8HWS3 928 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 LINC00346Q8IVM7 164 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 CEP97Q8IW35 865 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SLC39A11Q8N1S5 342 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 PAQR4Q8N4S7 273 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 HORMAD2Q8N7B1 307 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ARL14EPQ8N8R7 260 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 LRRC57Q8N9N7 239 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 OR52N4Q8NGI2 321 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 OR8K5Q8NH50 307 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 GOT1L1Q8NHS2 421 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 CEP76Q8TAP6 659 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 OSR1Q8TAX0 266 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 ZNF564Q8TBZ8 553 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 ZFPM2Q8WW38 1151 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 MSI2Q96DH6 328 aaKnown RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 ERLEC1Q96DZ1 483 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 PGAP3Q96FM1 320 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 LURAP1Q96LR2 239 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 CCDC43Q96MW1 224 aaKnown RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 ZNF578Q96N58 590 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 FRG2BQ96QU4 278 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SPAG5Q96R06 1193 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 TMEM47Q9BQJ4 181 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 FERMT1Q9BQL6 677 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 MXRA8Q9BRK3 442 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 THAP7Q9BT49 309 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 LHPPQ9H008 270 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 NT5C3AQ9H0P0 336 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 CDT1Q9H211 546 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 AAMDCQ9H7C9 122 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SLC38A10Q9HBR0 1119 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 MAGEE1Q9HCI5 957 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ZNF304Q9HCX3 659 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ZNF334Q9HCZ1 680 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 ASIC5Q9NY37 505 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 PSD3Q9NYI0 1048 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SLC17A6Q9P2U8 582 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 DKK2Q9UBU2 259 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SEL1LQ9UBV2 794 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 UTS2RQ9UKP6 389 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 CMAHPQ9Y471 501 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 CLDN16Q9Y5I7 305 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SNX5Q9Y5X3 404 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SQORQ9Y6N5 450 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 DOCK9Q9BZ29 2069 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ESPL1Q14674 2120 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 KIAA1549LQ6ZVL6 1849 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ZNF469Q96JG9 3925 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 PLXND1Q9Y4D7 1925 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ACANP16112 2415 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 NBEAL2Q6ZNJ1 2754 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TRBC2A0A5B9 178 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ESYT2A0FGR8 921 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 SLC22A23A1A5C7 686 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 HEATR9A2RTY3 570 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TRIM64A6NGJ6 449 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TRIM64BA6NI03 449 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TARM1B6A8C7 271 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 KLRF2D3W0D1 207 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 RRHO14718 337 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TP73O15350 636 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PRPF4O43172 522 aaKnown RBP eCLIP2.32□□□□□ -2.04
CALD1-216ENST00000473714 HCRTR2O43614 444 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 JRKO75564 520 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 OR2C1O95371 312 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PGM3O95394 542 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TGDSO95455 350 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 FYNP06241 537 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TPOP07202 933 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 HOXB5P09067 269 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 VPREB1P12018 145 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ETFAP13804 333 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 CD1EP15812 388 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ITGAXP20702 1163 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 EDN2P20800 178 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 BCKDHBP21953 392 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 CPT2P23786 658 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PON1P27169 355 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ATP5DP30049 168 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ADORA1P30542 326 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 CD52P31358 61 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 UBA7P41226 1012 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PRCPP42785 496 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 METAP2P50579 478 aaKnown RBP eCLIP2.32□□□□□ -2.04
CALD1-216ENST00000473714 PMS2P54278 862 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms