RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 QKIQ96PU8 341 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAF4-209ENST00000473421 COPS8Q99627 209 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 FAM118BQ9BPY3 351 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 FSD1LQ9BXM9 530 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 GBA3Q9H227 469 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 TXLNGQ9NUQ3 528 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 EURLQ9NYK6 297 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 PLA2G3Q9NZ20 509 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 STOX2Q9P2F5 926 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-209ENST00000473421 CDC23Q9UJX2 597 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 TDRKHQ9Y2W6 561 aaKnown RBP12.12□□□□□ -0.47
TRAF4-209ENST00000473421 PCNX1Q96RV3 2341 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 CCDC168Q8NDH2 2452 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 ZFHX3Q15911 3703 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 hCG_1818297A0A087WSY0 165 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 TRBV5-4A0A0C4DH59 114 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 A0A0J9YY10 115 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 KLHL33A6NCF5 533 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 C5orf60A6NFR6 353 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 C2orf81A6NN90 581 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 IFRD1O00458 451 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-209ENST00000473421 NRP2O60462 931 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 JRKO75564 520 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 F10P00742 488 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 MAGP20916 626 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 PSMB4P28070 264 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 MC4RP32245 332 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 ARHGAP25P42331 645 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 OR1D4P47884 311 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 KRTAP10-9P60411 292 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 AGAP7PQ5VUJ5 663 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 OVCH1Q7RTY7 1134 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 SNX20Q7Z614 316 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 ZNF295-AS1Q8N0V1 137 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 LINC01555Q8NAE3 123 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 OR11G2Q8NGC1 345 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 P3H4Q92791 437 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 RELTQ969Z4 430 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 MOCOSQ96EN8 888 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 THOC3Q96J01 351 aaKnown RBP12.11□□□□□ -0.47
TRAF4-209ENST00000473421 LURAP1Q96LR2 239 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 AGAP4Q96P64 663 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 HEMGNQ9BXL5 484 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 ZDHHC3Q9NYG2 299 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 IFNKQ9P0W0 207 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 TFR2Q9UP52 801 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 PLCL2Q9UPR0 1127 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 ASF1AQ9Y294 204 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 MED13LQ71F56 2210 aa12.11□□□□□ -0.47
TRAF4-209ENST00000473421 OR51F1A6NGY5 319 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 MAP3K7O43318 606 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 IGHEP01854 428 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 CELA2AP08217 269 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 PYGMP11217 842 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 TPH1P17752 444 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 ACRV1P26436 265 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 MST1P26927 711 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 PER3P56645 1201 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 OTUD4Q01804 1114 aaKnown RBP12.1□□□□□ -0.47
TRAF4-209ENST00000473421 DBN1Q16643 649 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 FCRL6Q6DN72 434 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 TLDC1Q6P9B6 456 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 MCATQ8IVS2 390 aaKnown RBP12.1□□□□□ -0.47
TRAF4-209ENST00000473421 PRSS58Q8IYP2 241 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 OR1N1Q8NGS0 311 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 PSMF1Q92530 271 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 C8orf44Q96CB5 159 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 CCDC120Q96HB5 630 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 IL17FQ96PD4 163 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 C17orf62Q9BQA9 187 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 NDC1Q9BTX1 674 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 MENTQ9BUN1 341 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 CHRNA10Q9GZZ6 450 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 LHPPQ9H008 270 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 OLAHQ9NV23 265 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 PIH1D1Q9NWS0 290 aaKnown RBP12.1□□□□□ -0.47
TRAF4-209ENST00000473421 IRAK4Q9NWZ3 460 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 DDX56Q9NY93 547 aaKnown RBP12.1□□□□□ -0.47
TRAF4-209ENST00000473421 MAU2Q9Y6X3 613 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 NF1P21359 2839 aa12.1□□□□□ -0.47
TRAF4-209ENST00000473421 KRT87PA6NCN2 255 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 ISM1B1AKI9 464 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 C19orf84I3L1E1 186 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 PCDH17O14917 1159 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 ONECUT2O95948 504 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 RALBP11234 206 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 ITGALP20701 1170 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 SHMT2P34897 504 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 GEMP55040 296 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 CSE1LP55060 971 aaKnown RBP12.09□□□□□ -0.47
TRAF4-209ENST00000473421 RPA4Q13156 261 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 TFDP2Q14188 446 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 GRB7Q14451 532 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 NAA30Q147X3 362 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-209ENST00000473421 TLR1Q15399 786 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 ZXDCQ2QGD7 858 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-209ENST00000473421 TAS2R42Q7RTR8 314 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 LAPTM4BQ86VI4 370 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms