RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PCDHB4Q9Y5E5 795 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 MAU2Q9Y6X3 613 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 ZNF407Q9C0G0 2248 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 DEFB108AA8MXU0 73 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 TGFBR3LH3BV60 316 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 J3KR12 359 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 MATN2O00339 956 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 WDR1O75083 606 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 NR3C1P04150 777 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 ZGLP1P0C6A0 271 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 ZFP36P26651 326 aaKnown RBP6.2□□□□□ -1.42
HDAC3-206ENST00000471968 MXI1P50539 228 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 DCDC1P59894 354 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 OCA2Q04671 838 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 LRMPQ12912 555 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 PDCLQ13371 301 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 XRCC4Q13426 336 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 TRIM14Q14142 442 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 MEP1AQ16819 746 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 ADGRG6Q86SQ4 1221 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 DAAM2Q86T65 1068 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 LAPTM4BQ86VI4 370 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 C19orf47Q8N9M1 422 aaKnown RBP6.2□□□□□ -1.42
HDAC3-206ENST00000471968 FAM184AQ8NB25 1140 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 STK32AQ8WU08 396 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 SCRN2Q96FV2 425 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 HS3ST6Q96QI5 342 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 SMIM14Q96QK8 99 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 TBCBQ99426 244 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 NPY6RQ99463 290 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 CNPPD1Q9BV87 410 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 SLCO5A1Q9H2Y9 848 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 OCEL1Q9H607 264 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 EML4Q9HC35 981 aaKnown RBP6.2□□□□□ -1.42
HDAC3-206ENST00000471968 SLC39A2Q9NP94 309 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 OR12D3Q9UGF7 316 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 COL7A1Q02388 2944 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 TENM2Q9NT68 2774 aa6.2□□□□□ -1.42
HDAC3-206ENST00000471968 A0A096LNT2 108 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 A0A1W2PQ72 361 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 FAM72CH0Y354 149 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 GOLGA8SH3BPF8 625 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 KLRC4-KLRK1H3BQV0 150 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 CHUKO15111 745 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 SLC16A5O15375 505 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ACTN4O43707 911 aaKnown RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 PALMO75781 387 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 SERPINC1P01008 464 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 IGHV4-31P0DP07 118 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 KRT13P13646 458 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 VCLP18206 1134 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 GABRA4P48169 554 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 AGFG1P52594 562 aaKnown RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 EMP2P54851 167 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 MLF1P58340 268 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 POU4F1Q01851 419 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ZIC1Q15915 447 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 FAM72AQ5TYM5 149 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ZNF468Q5VIY5 522 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 MANEALQ5VSG8 457 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 FAM166AQ6J272 317 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 FAM72DQ6L9T8 149 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 SEM1Q6ZVN7 128 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 FAM183BPQ6ZVS7 135 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 INTS8Q75QN2 995 aaKnown RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ABHD13Q7L211 337 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 FAM72BQ86X60 149 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 FAM131BQ86XD5 332 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ZNF547Q8IVP9 402 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 SULF2Q8IWU5 870 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 DTWD1Q8N5C7 304 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 C16orf52Q8NHV5 167 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 SPOCK2Q92563 424 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 REPS1Q96D71 796 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 TRMT61AQ96FX7 289 aaKnown RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 MCCC1Q96RQ3 725 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 NPAS2Q99743 824 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 CINPQ9BW66 212 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 NAA15Q9BXJ9 866 aaKnown RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ANGPTL4Q9BY76 406 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 PHACTR1Q9C0D0 580 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ZNF700Q9H0M5 742 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 PDFQ9HBH1 243 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 TRMT1Q9NXH9 659 aaKnown RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 DTLQ9NZJ0 730 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ZNF629Q9UEG4 869 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-206ENST00000471968 ACAD8Q9UKU7 415 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 STAP1Q9ULZ2 295 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 NEU3Q9UQ49 428 aa6.19□□□□□ -1.42
HDAC3-206ENST00000471968 MED12Q93074 2177 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 UBR4Q5T4S7 5183 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 IGHV4-30-2A0A087WSY4 118 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 A0A1W2PQ67 120 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 GTPBP10A4D1E9 387 aaKnown RBP6.18□□□□□ -1.42
HDAC3-206ENST00000471968 OR14I1A6ND48 311 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 GPR89AB7ZAQ6 455 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 BTN3A3O00478 584 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 BTN3A1O00481 513 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 DSCR3O14972 297 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 MTX2O75431 263 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms