RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 CTSL3PQ5NE16 218 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 PLEKHS1Q5SXH7 462 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 IZUMO3Q5VZ72 239 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 SPESP1Q6UW49 350 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 CLEC18BQ6UXF7 455 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 LMNTD1Q8N9Z9 388 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 CLEC18CQ8NCF0 446 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 OR1L3Q8NH93 324 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 THAP4Q8WY91 577 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 TRIM55Q9BYV6 548 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 CHST8Q9H2A9 424 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 FARSAQ9Y285 508 aaKnown RBP18.2■□□□□ 0.5
COMMD1-207ENST00000471704 TDRKHQ9Y2W6 561 aaKnown RBP18.2■□□□□ 0.5
COMMD1-207ENST00000471704 PCSK5Q92824 1860 aa18.2■□□□□ 0.5
COMMD1-207ENST00000471704 GOLGA8KD6RF30 607 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 GOLGA8TH3BQL2 631 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 PRMT5O14744 637 aaPredicted RBP18.19■□□□□ 0.5
COMMD1-207ENST00000471704 VAPBO95292 243 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 PDGFAP04085 211 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 CHRM5P08912 532 aaPredicted RBP18.19■□□□□ 0.5
COMMD1-207ENST00000471704 UGT2B7P16662 529 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 SHMT2P34897 504 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 RORAP35398 523 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 TTPAP49638 278 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 PLOD1Q02809 727 aaPredicted RBP18.19■□□□□ 0.5
COMMD1-207ENST00000471704 HSPA14Q0VDF9 509 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 IL10RAQ13651 578 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 ZIC1Q15915 447 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 LCN10Q6JVE6 187 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 CDHR3Q6ZTQ4 885 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 ASB18Q6ZVZ8 466 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 DSELQ8IZU8 1212 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 AGGF1Q8N302 714 aaeCLIP18.19■□□□□ 0.5
COMMD1-207ENST00000471704 MR1Q95460 341 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 MAGOHBQ96A72 148 aaKnown RBP18.19■□□□□ 0.5
COMMD1-207ENST00000471704 COL26A1Q96A83 441 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 OSBPL9Q96SU4 736 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 FAM60AQ9NP50 221 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 POLG2Q9UHN1 485 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 ANAPC5Q9UJX4 755 aa18.19■□□□□ 0.5
COMMD1-207ENST00000471704 USP9YO00507 2555 aaPredicted RBP18.19■□□□□ 0.5
COMMD1-207ENST00000471704 H3BMH7 237 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 AP3B1O00203 1094 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 MEN1O00255 615 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 ZNF185O15231 689 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 DNAJB5O75953 348 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 SLCO2B1O94956 709 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 CAPN1P07384 714 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 RAB40ALP0C0E4 278 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 RPS3P23396 243 aaKnown RBP eCLIP18.18■□□□□ 0.5
COMMD1-207ENST00000471704 PKLRP30613 574 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 GABRA4P48169 554 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 TYSND1Q2T9J0 566 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 CCDC137Q6PK04 289 aaKnown RBP18.18■□□□□ 0.5
COMMD1-207ENST00000471704 LINC01555Q8NAE3 123 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 ADAMTS17Q8TE56 1095 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 MIB2Q96AX9 1013 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 BIRC8Q96P09 236 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 MLXIPLQ9NP71 852 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 IL1RAPL1Q9NZN1 696 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 CIDEBQ9UHD4 219 aa18.18■□□□□ 0.5
COMMD1-207ENST00000471704 TMEM150CB9EJG8 249 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 PGRMC1O00264 195 aaKnown RBP18.17■□□□□ 0.5
COMMD1-207ENST00000471704 KLK3P07288 261 aaPredicted RBP18.17■□□□□ 0.5
COMMD1-207ENST00000471704 CTSBP07858 339 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 PPARGP37231 505 aaPredicted RBP18.17■□□□□ 0.5
COMMD1-207ENST00000471704 CD97P48960 835 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 SRSF1Q07955 248 aaKnown RBP eCLIP18.17■□□□□ 0.5
COMMD1-207ENST00000471704 KYNUQ16719 465 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 DNAJC21Q5F1R6 531 aaKnown RBP18.17■□□□□ 0.5
COMMD1-207ENST00000471704 KIAA0930Q6ICG6 404 aaPredicted RBP18.17■□□□□ 0.5
COMMD1-207ENST00000471704 FAM20CQ8IXL6 584 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 C19orf47Q8N9M1 422 aaKnown RBP18.17■□□□□ 0.5
COMMD1-207ENST00000471704 TEX19Q8NA77 164 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 ACTRT1Q8TDG2 376 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 ASZ1Q8WWH4 475 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 LPGAT1Q92604 370 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 NLNQ9BYT8 704 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 FANCEQ9HB96 536 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 TRMT1Q9NXH9 659 aaKnown RBP18.17■□□□□ 0.5
COMMD1-207ENST00000471704 OR6C2Q9NZP2 312 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 PLAAQ9Y263 795 aa18.17■□□□□ 0.5
COMMD1-207ENST00000471704 KRT87PA6NCN2 255 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 USP27XA6NNY8 438 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 F8W8V4 182 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 PHF2O75151 1096 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 F7P08709 466 aaPredicted RBP18.16■□□□□ 0.5
COMMD1-207ENST00000471704 EIF3BP55884 814 aaKnown RBP18.16■□□□□ 0.5
COMMD1-207ENST00000471704 UBAP2LQ14157 1087 aaKnown RBP18.16■□□□□ 0.5
COMMD1-207ENST00000471704 DEFB110Q30KQ9 67 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 PAPD7Q5XG87 772 aaKnown RBP18.16■□□□□ 0.5
COMMD1-207ENST00000471704 CPZQ66K79 652 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 PTRHD1Q6GMV3 140 aaKnown RBP18.16■□□□□ 0.5
COMMD1-207ENST00000471704 SPNS2Q8IVW8 549 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 CFAP61Q8NHU2 1237 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 SERPINB12Q96P63 405 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 IL17FQ96PD4 163 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 TSSK1BQ9BXA7 367 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 PCMTD2Q9NV79 361 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 GALPQ9UBC7 116 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms