RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 GSC2O15499 205 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 OTCP00480 354 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 CYP2A7P20853 494 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 RPIAP49247 311 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 HNMTP50135 292 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 BOP1Q14137 746 aaKnown RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 HERC3Q15034 1050 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 PHKG1Q16816 387 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 BCL7AQ4VC05 210 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 KHDC1Q4VXA5 237 aaKnown RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 RAET1GQ6H3X3 334 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 PRR23CQ6ZRP0 262 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 UBE2R2Q712K3 238 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 TWIST2Q8WVJ9 160 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 SKA2Q8WVK7 121 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 MCUR1Q96AQ8 359 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 SLC6A18Q96N87 628 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 ORAI3Q9BRQ5 295 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 CD244Q9BZW8 370 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 TRIM39Q9HCM9 518 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 FZD3Q9NPG1 666 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 WWOXQ9NZC7 414 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 CA5BQ9Y2D0 317 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 COQ6Q9Y2Z9 468 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 LNP1A1A4G5 178 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 GFYI3L273 518 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 PPP6CO00743 305 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 KHNYNO15037 678 aaKnown RBP17.06■□□□□ 0.32
HSPG2-208ENST00000471322 UBDO15205 165 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 INPP4BO15327 924 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 BCAT2O15382 392 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-208ENST00000471322 VEGFDO43915 354 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 MGRN1O60291 552 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 GUCA1CO95843 209 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 COX4I1P13073 169 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 GNSP15586 552 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 CD27P26842 260 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 CSNK1EP49674 416 aaKnown RBP17.06■□□□□ 0.32
HSPG2-208ENST00000471322 AP1S2P56377 157 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 MXRA7P84157 204 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 RIPK1Q13546 671 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 GTF2H2Q13888 395 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 GTF2H3Q13889 308 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 SYTL3Q4VX76 610 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 GTF2H2CQ6P1K8 395 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 TMEM220Q6QAJ8 160 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 LARP4Q71RC2 724 aaKnown RBP eCLIP17.06■□□□□ 0.32
HSPG2-208ENST00000471322 PELI3Q8N2H9 469 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 OR2I1PQ8NGU4 316 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 RP9Q8TA86 221 aaKnown RBP17.06■□□□□ 0.32
HSPG2-208ENST00000471322 MCOLN3Q8TDD5 553 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 DLG3Q92796 817 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 TMEM159Q96B96 161 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 CADM1Q9BY67 442 aaKnown RBP17.06■□□□□ 0.32
HSPG2-208ENST00000471322 PCED1AQ9H1Q7 454 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 PREBQ9HCU5 417 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 TM9SF3Q9HD45 589 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 KLC4Q9NSK0 619 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 OPTCQ9UBM4 332 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 ANGPTL3Q9Y5C1 460 aa17.06■□□□□ 0.32
HSPG2-208ENST00000471322 A0A1W2PPC4 97 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 OR2AG2A6NM03 316 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 TAPBPO15533 448 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 TM7SF2O76062 418 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 SOD1P00441 154 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 PIK3R1P27986 724 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 GGT5P36269 586 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 ATP4BP51164 291 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 PLOD1Q02809 727 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-208ENST00000471322 SQLEQ14534 574 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 AGERQ15109 404 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 DUOXA1Q1HG43 343 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 AASDHQ4L235 1098 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-208ENST00000471322 FBXW10Q5XX13 1052 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 ADAMTSL4Q6UY14 1074 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 GOLGA7Q7Z5G4 137 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 SYVN1Q86TM6 617 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 C1orf216Q8TAB5 229 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 GLMNQ92990 594 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 ATP6V1E2Q96A05 226 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 CATSPER2Q96P56 530 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 GTPBP2Q9BX10 602 aaKnown RBP17.05■□□□□ 0.32
HSPG2-208ENST00000471322 NOL11Q9H8H0 719 aaKnown RBP17.05■□□□□ 0.32
HSPG2-208ENST00000471322 AASDHPPTQ9NRN7 309 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 ARL15Q9NXU5 204 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 PDE10AQ9Y233 779 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 PLXNA2O75051 1894 aa17.05■□□□□ 0.32
HSPG2-208ENST00000471322 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.04■□□□□ 0.32
HSPG2-208ENST00000471322 IGLON5A6NGN9 336 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 K7EPI3 171 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 LATO43561 262 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 LRP3O75074 770 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 STK16O75716 305 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 CPA2P48052 419 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 CCR5P51681 352 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 CTSCP53634 463 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 FBXO48Q5FWF7 155 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 ZNF648Q5T619 568 aaPredicted RBP17.04■□□□□ 0.32
HSPG2-208ENST00000471322 PEAR1Q5VY43 1037 aaPredicted RBP17.04■□□□□ 0.32
HSPG2-208ENST00000471322 HORMAD1Q86X24 394 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms