RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 C7P10643 843 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 IMPA1P29218 277 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 NAE1Q13564 534 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 AGKQ53H12 422 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 ZNF852Q6ZMS4 543 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 PGBD3Q8N328 593 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 OXR1Q8N573 874 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 PPFIBP2Q8ND30 876 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 FAM13CQ8NE31 585 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 OR9I1Q8NGQ6 314 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 GUCD1Q96NT3 240 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 BTBD1Q9H0C5 482 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 PSMD13Q9UNM6 376 aa17.65■□□□□ 0.42
SMC4-211ENST00000469858 ACADLP28330 430 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 NUDT2P50583 147 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 ATP4BP51164 291 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 NME5P56597 212 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 RPA4Q13156 261 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 PTK2BQ14289 1009 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 CPSF6Q16630 551 aaKnown RBP eCLIP17.64■□□□□ 0.412e-6■□□□□ 10
SMC4-211ENST00000469858 OGFOD2Q6N063 350 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 PAOXQ6QHF9 649 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 Q6ZSR9 355 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 CHST15Q7LFX5 561 aaPredicted RBP17.64■□□□□ 0.41
SMC4-211ENST00000469858 PDZD3Q86UT5 571 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 THOC6Q86W42 341 aaKnown RBP17.64■□□□□ 0.41
SMC4-211ENST00000469858 ARHGAP24Q8N264 748 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 CHCHD4Q8N4Q1 142 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 FBXO15Q8NCQ5 510 aaPredicted RBP17.64■□□□□ 0.41
SMC4-211ENST00000469858 RCN3Q96D15 328 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 THTPAQ9BU02 230 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 APOOQ9BUR5 198 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 ZDHHC5Q9C0B5 715 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 FARSBQ9NSD9 589 aaKnown RBP17.64■□□□□ 0.41
SMC4-211ENST00000469858 INTS7Q9NVH2 962 aaKnown RBP17.64■□□□□ 0.41
SMC4-211ENST00000469858 MOSPD1Q9UJG1 213 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 DNMT3AQ9Y6K1 912 aaPredicted RBP17.64■□□□□ 0.41
SMC4-211ENST00000469858 FUCA1P04066 466 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 CHRNB1P11230 501 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 ACP5P13686 325 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 ITGAXP20702 1163 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 TFF2Q03403 129 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 NR6A1Q15406 480 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 ATP6AP1LQ52LC2 224 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 SGO1Q5FBB7 561 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 SFRP1Q8N474 314 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 C1orf50Q9BV19 199 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 RASSF4Q9H2L5 321 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 POLMQ9NP87 494 aaPredicted RBP17.64■□□□□ 0.41
SMC4-211ENST00000469858 ASF1AQ9Y294 204 aa17.64■□□□□ 0.41
SMC4-211ENST00000469858 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.64■□□□□ 0.41
SMC4-211ENST00000469858 CACNB4O00305 520 aaPredicted RBP17.63■□□□□ 0.41
SMC4-211ENST00000469858 MGRN1O60291 552 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 ULK1O75385 1050 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 CEACAM5P06731 702 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 HALP42357 657 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 DIO3P55073 304 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 CLDN2P57739 230 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 MAPRE2Q15555 327 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 C6orf136Q5SQH8 315 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 METRNLQ641Q3 311 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 SPATA19Q7Z5L4 167 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 SYTL1Q8IYJ3 562 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 MIER2Q8N344 545 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 FNDC5Q8NAU1 212 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 OR2T34Q8NGX1 318 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 ASB12Q8WXK4 309 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 SLC29A3Q9BZD2 475 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 MRPL40Q9NQ50 206 aaKnown RBP17.63■□□□□ 0.41
SMC4-211ENST00000469858 EBF1Q9UH73 591 aa17.63■□□□□ 0.41
SMC4-211ENST00000469858 ZNF490Q9ULM2 529 aaPredicted RBP17.63■□□□□ 0.41
SMC4-211ENST00000469858 POM121BA6NF01 834 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 LRRC72A6NJI9 287 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 MANBAO00462 879 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 LATO43561 262 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 IDO1P14902 403 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 GPX3P22352 226 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 ERVK-8P63133 956 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 RPS6KA2Q15349 733 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 ZRSR2Q15696 482 aaKnown RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 UNC5DQ6UXZ4 953 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 TRIM69Q86WT6 500 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 DEFB107AQ8IZN7 70 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 OR9A1PQ8NGU1 263 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 OR56A3Q8NH54 315 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 ZNF480Q8WV37 535 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 MTFMTQ96DP5 389 aaKnown RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 CLPTM1LQ96KA5 538 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 MMADHCQ9H3L0 296 aaPredicted RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 OSGEPL1Q9H4B0 414 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 SLC17A4Q9Y2C5 497 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 CA5BQ9Y2D0 317 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 LSM1O15116 133 aaKnown RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 PRAMEF4O60810 478 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 KRT6AP02538 564 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 KRT6BP04259 564 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 RPL10P27635 214 aaKnown RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 KRT6CP48668 564 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 CHIT1Q13231 466 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 TSTA3Q13630 321 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms