RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PIK3CBP42338 1070 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 RGS8P57771 180 aaPredicted RBP14.77□□□□□ -0.05
LIMS2-213ENST00000469300 ACTR3P61158 418 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 LMAN2Q12907 356 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 KCNC3Q14003 757 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 GRM2Q14416 872 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 SUZ12Q15022 739 aaKnown RBP14.77□□□□□ -0.05
LIMS2-213ENST00000469300 PLEKHS1Q5SXH7 462 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 CILP2Q8IUL8 1156 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 C19orf18Q8NEA5 215 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 CMTM7Q96FZ5 175 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 BTBD9Q96Q07 612 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 EQTNQ9NQ60 294 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 RSL24D1Q9UHA3 163 aaKnown RBP14.77□□□□□ -0.05
LIMS2-213ENST00000469300 MATN2O00339 956 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 BEST1O76090 585 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 FESP07332 822 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 SEMG2Q02383 582 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 NEDD8Q15843 81 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 SPIN4Q56A73 249 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 RTL4Q6ZR62 310 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 SLC39A11Q8N1S5 342 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 RGMAQ96B86 450 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 OLFM1Q99784 485 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 PAAF1Q9BRP4 392 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 CHID1Q9BWS9 393 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 NSUN3Q9H649 340 aaKnown RBP14.77□□□□□ -0.05
LIMS2-213ENST00000469300 MAP10Q9P2G4 905 aa14.77□□□□□ -0.05
LIMS2-213ENST00000469300 PGM3O95394 542 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 IDH3AP50213 366 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 LIPEQ05469 1076 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 FCHO2Q0JRZ9 810 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 SLBPQ14493 270 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 SLC5A9Q2M3M2 681 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 CST9Q5W186 159 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 FAM171BQ6P995 826 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 ABHD13Q7L211 337 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 SMYD1Q8NB12 490 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 KIAA1191Q96A73 305 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 OSBPL7Q9BZF2 842 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 TRIM39Q9HCM9 518 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 ACSS2Q9NR19 701 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 BTBD3Q9Y2F9 522 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 PRORSD1PA6NEY8 169 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 GRID2O43424 1007 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 KRT36O76013 467 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 PIM1P11309 404 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 PRG2P13727 222 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 FGFR3P22607 806 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 BNIP1Q12981 228 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 PIK3R6Q5UE93 754 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 FRG2Q64ET8 278 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 PM20D1Q6GTS8 502 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 KLHDC10Q6PID8 442 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 RBM15BQ8NDT2 890 aaKnown RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 ZCCHC10Q8TBK6 192 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 ANKRD49Q8WVL7 239 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 DNASE1L2Q92874 299 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 KLHDC7BQ96G42 594 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 FRG2BQ96QU4 278 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 IFT80Q9P2H3 777 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 TMED5Q9Y3A6 229 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 A8MT66 165 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 MCIDASD6RGH6 385 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 MATN4O95460 622 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 MPIP34949 423 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 NRLP54845 237 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 RPS21P63220 83 aaKnown RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 NFKB2Q00653 900 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 GSTM4Q03013 218 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 KLF1Q13351 362 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 HERC3Q15034 1050 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 PDK3Q15120 406 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 FBXO43Q4G163 708 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 CLLU1OSQ5K130 101 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 FAM129CQ86XR2 697 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 UBR7Q8N806 425 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 TRPV1Q8NER1 839 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 SLC38A4Q969I6 547 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 DUSP26Q9BV47 211 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 NECTIN3Q9NQS3 549 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 MYH10P35580 1976 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 A0A0D9SEW6 157 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 KLF11O14901 512 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 ADAMDEC1O15204 470 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 TGM5O43548 720 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 PCDH7O60245 1069 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 SHOX2O60902 331 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 PLA2G16P53816 162 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 TAS2R50P59544 299 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 TUBA4AP68366 448 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 NRG1Q02297 640 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 LACTB2Q53H82 288 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 BNIPLQ7Z465 357 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 BORCS5Q969J3 196 aa14.76□□□□□ -0.05
LIMS2-213ENST00000469300 RGS17Q9UGC6 210 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-213ENST00000469300 EFCAB10A6NFE3 127 aa14.75□□□□□ -0.05
LIMS2-213ENST00000469300 TNFRSF21O75509 655 aa14.75□□□□□ -0.05
LIMS2-213ENST00000469300 CSNK2A2P19784 350 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms