RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TMEM82A0PJX8 343 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 PIPSLA2A3N6 862 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 BCLAF3A2AJT9 711 aaKnown RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TMEM191CA6NGB0 347 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 OR6C70A6NIJ9 312 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 A8MU76 341 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 C2orf74A8MZ97 194 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 PLOD2O00469 737 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 BTN3A3O00478 584 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 EI24O14681 340 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 MRASO14807 208 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 UBDO15205 165 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 INPPL1O15357 1258 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 RGS5O15539 181 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 RGS10O43665 173 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 PRKAB2O43741 272 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 GRIN3BO60391 1043 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF623O75123 536 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 USP12O75317 370 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 PIAS1O75925 651 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SORBS2O94875 1100 aaKnown RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SEMA3DO95025 777 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CSPG5O95196 566 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CBX7O95931 251 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 C1QAP02745 245 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 RPLP0P05388 317 aaKnown RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CDK1P06493 297 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 GNAO1P09471 354 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 RAP2AP10114 183 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 RRASP10301 218 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SRCP12931 536 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ICAM2P13598 275 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 IL1RNP18510 177 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 HTR1EP28566 365 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 MAGEA3P43357 314 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 PPP3CCP48454 512 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 NOVP48745 357 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 NR2C2P49116 596 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ALDH9A1P49189 494 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CASP4P49662 377 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 RAB13P51153 203 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF143P52747 638 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ATP12AP54707 1039 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 DNAJB13P59910 316 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CDH17Q12864 832 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SNTA1Q13424 505 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ADAM15Q13444 863 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SEMA5AQ13591 1074 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 KEAP1Q14145 624 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF273Q14593 569 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF169Q14929 603 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 QPRTQ15274 297 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 COL24A1Q17RW2 1714 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ADPRMQ3LIE5 342 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CBWD6Q4V339 395 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SLC9B1Q4ZJI4 515 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 FAM98BQ52LJ0 330 aaKnown RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SETMARQ53H47 684 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CBWD3Q5JTY5 395 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 WIPI1Q5MNZ9 446 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CBWD5Q5RIA9 395 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 GPATCH4Q5T3I0 446 aaKnown RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 LRRC66Q68CR7 880 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 REP15Q6BDI9 236 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CFAP161Q6P656 301 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 C16orf54Q6UWD8 224 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ANGPTL8Q6UXH0 198 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TFAP2EQ6VUC0 442 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 OVCH2Q7RTZ1 564 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CCDC190Q86UF4 302 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TRIM69Q86WT6 500 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 HIPK1Q86Z02 1210 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CDKL3Q8IVW4 592 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TIGD4Q8IY51 512 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 GHDCQ8N2G8 530 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 EMC1Q8N766 993 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ARRDC4Q8NCT1 418 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 FBXL13Q8NEE6 735 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF680Q8NEM1 530 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 OR4D10Q8NGI6 311 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 C9orf43Q8TAL5 461 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 NDNFQ8TB73 568 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 MAGEE2Q8TD90 523 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 FAR1Q8WVX9 515 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 HAS1Q92839 578 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CREB3L1Q96BA8 519 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TBC1D20Q96BZ9 403 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 FAF2Q96CS3 445 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 NSMCE2Q96MF7 247 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 RNF145Q96MT1 663 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 GPR137Q96N19 417 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 MUS81Q96NY9 551 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SLC38A3Q99624 504 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 DPH2Q9BQC3 489 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 FAM213AQ9BRX8 229 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 PDCD10Q9BUL8 212 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CINPQ9BW66 212 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 MND1Q9BWT6 205 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 NUSAP1Q9BXS6 441 aaKnown RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ITPAQ9BY32 194 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms