RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CCDC97	Q96F63	343 aa	Predicted RBP	11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	MRPL57	Q9BQC6	102 aa	Known RBP	11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	FAM96A	Q9H5X1	160 aa		11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	TRIM39	Q9HCM9	518 aa		11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	ZNHIT2	Q9UHR6	403 aa		11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	TRMT6	Q9UJA5	497 aa	Known RBP	11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	ACSL6	Q9UKU0	697 aa		11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	TMCO1	Q9UM00	188 aa		11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	NBEA	Q8NFP9	2946 aa		11.78	□□□□□ -0.52
CTNS-205	ENST00000467663	KLK10	O43240	276 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	RRP9	O43818	475 aa	Known RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	NUAK1	O60285	661 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	PLIN3	O60664	434 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	SHOX2	O60902	331 aa	Predicted RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	KCNJ13	O60928	360 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	H2AFY	O75367	372 aa	Known RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	EML2	O95834	649 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	SAT1	P21673	171 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	AKT1	P31749	480 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	FASLG	P48023	281 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	IL2	P60568	153 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	GTF2H3	Q13889	308 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	AMZ1	Q400G9	498 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	CTSL3P	Q5NE16	218 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	CHST15	Q7LFX5	561 aa	Predicted RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	GPR155	Q7Z3F1	870 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	CEP97	Q8IW35	865 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	HOMEZ	Q8IX15	550 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	SFRP1	Q8N474	314 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	ANKRD42	Q8N9B4	389 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	SLC37A2	Q8TED4	501 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	CKAP2	Q8WWK9	683 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	ZBTB9	Q96C00	473 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	MAGEB18	Q96M61	343 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	BBC3	Q96PG8	261 aa	Predicted RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	UBL7	Q96S82	380 aa	Predicted RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	NDN	Q99608	321 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	OLFM1	Q99784	485 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	DERL2	Q9GZP9	239 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	MRPL46	Q9H2W6	279 aa	Known RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	SEMA6C	Q9H3T2	930 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	TFB2M	Q9H5Q4	396 aa	Known RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	CAB39L	Q9H9S4	337 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	RDH14	Q9HBH5	336 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	ATXN10	Q9UBB4	475 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	PRKAB1	Q9Y478	270 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	LOXL2	Q9Y4K0	774 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	PTPRQ	Q9UMZ3	2332 aa		11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.77	□□□□□ -0.53
CTNS-205	ENST00000467663	IGSF10	Q6WRI0	2623 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	IGHV1OR21-1	A0A087WYE8	117 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	TEX51	A0A1B0GUA7	166 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	C17orf113	A0A1B0GUU1	675 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663		A6NCN8	305 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	SYCE1L	A8MT33	242 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	KLF11	O14901	512 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	CHUK	O15111	745 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	NVL	O15381	856 aa	Known RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	PHGDH	O43175	533 aa	Known RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	GRID2	O43424	1007 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	OR1I1	O60431	355 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	CCDC166	P0CW27	439 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	HGF	P14210	728 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	ZNF8	P17098	575 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	TAC1	P20366	129 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	SLC5A2	P31639	672 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	CLCNKA	P51800	687 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	CDKN2D	P55273	166 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	WDR4	P57081	412 aa	Known RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	TMPRSS3	P57727	454 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	CXADR	P78310	365 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	TMEM115	Q12893	351 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	BIRC2	Q13490	618 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	MPP2	Q14168	576 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	PDK4	Q16654	411 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	BCL7A	Q4VC05	210 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	PLEKHS1	Q5SXH7	462 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	ATG16L1	Q676U5	607 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	IYD	Q6PHW0	289 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	NEK10	Q6ZWH5	1172 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	USP53	Q70EK8	1073 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	OTOA	Q7RTW8	1153 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	CENPL	Q8N0S6	344 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	SNRNP27	Q8WVK2	155 aa	Known RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	LINC00615	Q96LM1	132 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	FAM111A	Q96PZ2	611 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	GPR21	Q99679	349 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	CMKLR1	Q99788	373 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	DPYSL5	Q9BPU6	564 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	NUDT22	Q9BRQ3	303 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	KCNK4	Q9NYG8	393 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	TBC1D29	Q9UFV1	150 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	PISD	Q9UG56	409 aa		11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	RUVBL2	Q9Y230	463 aa	Known RBP	11.76	□□□□□ -0.53
CTNS-205	ENST00000467663	IGHV5-10-1	A0A0J9YXX1	117 aa		11.75	□□□□□ -0.53
CTNS-205	ENST00000467663	FOXO6	A8MYZ6	492 aa		11.75	□□□□□ -0.53
CTNS-205	ENST00000467663	HGS	O14964	777 aa	Predicted RBP	11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms