RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 NCK1P16333 377 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 CDH3P22223 829 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 PSMA3P25788 255 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 SLC7A1P30825 629 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 PLA2G16P53816 162 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 EIF4HQ15056 248 aaKnown RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 INAQ16352 499 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 TAZQ16635 292 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 ITPRIPL2Q3MIP1 535 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 SAMD14Q8IZD0 417 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 FIBINQ8TAL6 211 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 RASSF5Q8WWW0 418 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 SMPDL3AQ92484 453 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 PCDHAC1Q9H158 963 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 SLCO3A1Q9UIG8 710 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 CNOT6Q9ULM6 557 aaKnown RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 OR6A2O95222 327 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 MED26O95402 600 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 IFNW1P05000 195 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 CD1DP15813 335 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 GLDCP23378 1020 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 CCR8P51685 355 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 CLCNKAP51800 687 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 STX4Q12846 297 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 TRNP1Q6NT89 227 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 PRR23BQ6ZRT6 265 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 ZBED6CLQ96FA7 236 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 CD244Q9BZW8 370 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 PAIP1Q9H074 479 aaKnown RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 A0A1W2PP18 115 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 UGT2B11O75310 529 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 TBX10O75333 385 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 RFPL2O75678 378 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 THRBP10828 461 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 PFKLP17858 780 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 TALDO1P37837 337 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 PRR5P85299 388 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 TMEM115Q12893 351 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 ADGRE1Q14246 886 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 DSC3Q14574 896 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 FAM26DQ5JW98 314 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 MBOAT1Q6ZNC8 495 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 RPS27LQ71UM5 84 aaKnown RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 THOC6Q86W42 341 aaKnown RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 CEP97Q8IW35 865 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 CAMKK1Q8N5S9 505 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 CGREF1Q99674 301 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 CHID1Q9BWS9 393 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 EQTNQ9NQ60 294 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 LYVE1Q9Y5Y7 322 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 XRCC1P18887 633 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 FOXM1Q08050 763 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 BIKQ13323 160 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 SPIN4Q56A73 249 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 SCAMP4Q969E2 229 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 ZNF382Q96SR6 550 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 SFXN1Q9H9B4 322 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 MRPS30Q9NP92 439 aaKnown RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 PDP1Q9P0J1 537 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-203ENST00000467558 ADAM30Q9UKF2 790 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 SCN9AQ15858 1988 aa13.49□□□□□ -0.25
BRAT1-203ENST00000467558 ADAMDEC1O15204 470 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 UGT2B17O75795 530 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 IGFBP5P24593 272 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 MRPS15P82914 257 aaKnown RBP13.48□□□□□ -0.25
BRAT1-203ENST00000467558 USP39Q53GS9 565 aaKnown RBP13.48□□□□□ -0.25
BRAT1-203ENST00000467558 NCEH1Q6PIU2 408 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 BNIPLQ7Z465 357 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 OR7A2PQ8NGA2 310 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 MGME1Q9BQP7 344 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 RAPGEFL1Q9UHV5 662 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 ERGIC3Q9Y282 383 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 KIAA1551Q9HCM1 1747 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 PNMA8CA0A1B0GUJ8 204 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 MANBAO00462 879 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 RAP2AP10114 183 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 RANBP1P43487 201 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 MAPK10P53779 464 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 CREB5Q02930 508 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 EMX2Q04743 252 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 ARMCX4Q5H9R4 360 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 TOP1MTQ969P6 601 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 LMLNQ96KR4 655 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 LAMB2P55268 1798 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 TCRBV5S1A1TA0A578 114 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 K7ERQ8 282 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 SCAMP1O15126 338 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 NELFEP18615 380 aaKnown RBP13.48□□□□□ -0.25
BRAT1-203ENST00000467558 GSTT1P30711 240 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 TAS2R41P59536 307 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 DSC1Q08554 894 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 TRAF3Q13114 568 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 FAM92BQ6ZTR7 304 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-203ENST00000467558 ZNF598Q86UK7 904 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms