RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SLC5A12Q1EHB4 618 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 DEFB110Q30KQ9 67 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 ZNF385CQ66K41 422 aaPredicted RBP18.19■□□□□ 0.5
SF3A1-205ENST00000463818 C4orf22Q6V702 233 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 ZNF662Q6ZS27 426 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 FAM20CQ8IXL6 584 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 KRT222Q8N1A0 295 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 DNAJC22Q8N4W6 341 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 MAIP1Q8WWC4 291 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 SLC25A23Q9BV35 468 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 BFARQ9NZS9 450 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 ZKSCAN5Q9Y2L8 839 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 AP1M2Q9Y6Q5 423 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 SEC16AO15027 2179 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 APOA4P06727 396 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 CTSBP07858 339 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 CCDC175P0C221 793 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 NMBRP28336 390 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 PKLRP30613 574 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 TTPAP49638 278 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 RAB28P51157 221 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 MLLT10P55197 1068 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 NCF4Q15080 339 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 MLIPQ5VWP3 458 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 PTRHD1Q6GMV3 140 aaKnown RBP18.18■□□□□ 0.5
SF3A1-205ENST00000463818 C2orf73Q8N5S3 287 aaPredicted RBP18.18■□□□□ 0.5
SF3A1-205ENST00000463818 ZBTB2Q8N680 514 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 LMNTD1Q8N9Z9 388 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 IL22Q9GZX6 179 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 GRPEL1Q9HAV7 217 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 TREX1Q9NSU2 369 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 CIDEBQ9UHD4 219 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 PLAAQ9Y263 795 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 PCDHGA9Q9Y5G4 932 aaKnown RBP18.18■□□□□ 0.5
SF3A1-205ENST00000463818 NBASA2RRP1 2371 aa18.18■□□□□ 0.5
SF3A1-205ENST00000463818 C9J4A7 227 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 CEP104O60308 925 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 TMEM63AO94886 807 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 SLCO2B1O94956 709 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 PGDP52209 483 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 KCTD19Q17RG1 926 aaPredicted RBP18.17■□□□□ 0.5
SF3A1-205ENST00000463818 C1orf189Q5VU69 101 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 RHBDD2Q6NTF9 364 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 LINC01555Q8NAE3 123 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 IL17FQ96PD4 163 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 P2RY12Q9H244 342 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 MLXIPLQ9NP71 852 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 PLCL2Q9UPR0 1127 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 KLHL20Q9Y2M5 609 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 PIKFYVEQ9Y2I7 2098 aa18.17■□□□□ 0.5
SF3A1-205ENST00000463818 AP3B1O00203 1094 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 NDUFS3O75489 264 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 RPN2P04844 631 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 ATXN8OSP0DMR3 200 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 CD9P21926 228 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 DCDP81605 110 aaKnown RBP18.16■□□□□ 0.5
SF3A1-205ENST00000463818 GRB7Q14451 532 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 TMED2Q15363 201 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 TLDC1Q6P9B6 456 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 CES3Q6UWW8 571 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 UNC5DQ6UXZ4 953 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 LRRC8AQ8IWT6 810 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 ZNF655Q8N720 491 aaPredicted RBP18.16■□□□□ 0.5
SF3A1-205ENST00000463818 MIB2Q96AX9 1013 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 GBP5Q96PP8 586 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 DHRS4Q9BTZ2 278 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 MENTQ9BUN1 341 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 IRAK4Q9NWZ3 460 aa18.16■□□□□ 0.5
SF3A1-205ENST00000463818 UBR5O95071 2799 aaPredicted RBP18.15■□□□□ 0.5
SF3A1-205ENST00000463818 TCRBV7S3A2A0A539 114 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 ZNF185O15231 689 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 ZSCAN9O15535 394 aaPredicted RBP18.15■□□□□ 0.5
SF3A1-205ENST00000463818 KLF7O75840 302 aaPredicted RBP18.15■□□□□ 0.5
SF3A1-205ENST00000463818 CEACAM4O75871 244 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 MAGP20916 626 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 MGAT1P26572 445 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 CXCR5P32302 372 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 PAPD7Q5XG87 772 aaKnown RBP18.15■□□□□ 0.5
SF3A1-205ENST00000463818 LRRC8BQ6P9F7 803 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 MED25Q71SY5 747 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 DCUN1D3Q8IWE4 304 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 MPP5Q8N3R9 675 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 TMEM102Q8N9M5 508 aaPredicted RBP18.15■□□□□ 0.5
SF3A1-205ENST00000463818 TRIM58Q8NG06 486 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 SLC22A18Q96BI1 424 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 MFSD3Q96ES6 412 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 PANX3Q96QZ0 392 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 C17orf62Q9BQA9 187 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 KIFC1Q9BW19 673 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 HOMER3Q9NSC5 361 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 EURLQ9NYK6 297 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.15■□□□□ 0.5
SF3A1-205ENST00000463818 DHCR7Q9UBM7 475 aaKnown RBP18.15■□□□□ 0.5
SF3A1-205ENST00000463818 GPN3Q9UHW5 284 aaPredicted RBP18.15■□□□□ 0.5
SF3A1-205ENST00000463818 GNPTGQ9UJJ9 305 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 SLC39A10Q9ULF5 831 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 PADI2Q9Y2J8 665 aa18.15■□□□□ 0.5
SF3A1-205ENST00000463818 A6NL46 340 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 TTLL8A6PVC2 850 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 VAPBO95292 243 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms