RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ARSFP54793 590 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 CDH17Q12864 832 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 MYBPC3Q14896 1274 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 SLC5A12Q1EHB4 618 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 NKAIN1Q4KMZ8 207 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 PRR30Q53SZ7 412 aaPredicted RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 DNAJC21Q5F1R6 531 aaKnown RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 AADACL2Q6P093 401 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 AFTPHQ6ULP2 937 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 PPP1R21Q6ZMI0 780 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 TAB3Q8N5C8 712 aaPredicted RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 GSDMBQ8TAX9 411 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 GBP5Q96PP8 586 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 ATP13A2Q9NQ11 1180 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 INTS7Q9NVH2 962 aaKnown RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 PIH1D1Q9NWS0 290 aaKnown RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 P4HTMQ9NXG6 502 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 SPHK1Q9NYA1 384 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 IMPACTQ9P2X3 320 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 DHCR7Q9UBM7 475 aaKnown RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 PRSS21Q9Y6M0 314 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 SLC5A10A0PJK1 596 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 CCDC162PA2VCL2 907 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 MROH6A6NGR9 719 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 SEMA7AO75326 666 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 ALAS2P22557 587 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 MRPL49Q13405 166 aaKnown RBP14.83□□□□□ -0.04
SKA3-204ENST00000462482 SLC9A5Q14940 896 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 ZIC1Q15915 447 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 TTC23LQ6PF05 361 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 Q8NA96 180 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 ASZ1Q8WWH4 475 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 MRFAP1L1Q96HT8 127 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 VPS50Q96JG6 964 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 TMEM121Q9BTD3 319 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 ANAPC5Q9UJX4 755 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 PLAGL1Q9UM63 463 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 CDYLQ9Y232 598 aa14.83□□□□□ -0.04
SKA3-204ENST00000462482 GRID2IPA4D2P6 1211 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 OR51F1A6NGY5 319 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 APOA4P06727 396 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 STIP1P31948 543 aaKnown RBP14.82□□□□□ -0.04
SKA3-204ENST00000462482 FOXN2P32314 431 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 RAB28P51157 221 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 CSE1LP55060 971 aaKnown RBP14.82□□□□□ -0.04
SKA3-204ENST00000462482 PRAMEP78395 509 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 HSPA14Q0VDF9 509 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 KIF5AQ12840 1032 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 TMED2Q15363 201 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 PLEKHN1Q494U1 663 aaPredicted RBP14.82□□□□□ -0.04
SKA3-204ENST00000462482 CCDC38Q502W7 563 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 FASTKD1Q53R41 847 aaKnown RBP14.82□□□□□ -0.04
SKA3-204ENST00000462482 AARS2Q5JTZ9 985 aaKnown RBP14.82□□□□□ -0.04
SKA3-204ENST00000462482 NAPRTQ6XQN6 538 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 NLRP9Q7RTR0 991 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 DNAJC22Q8N4W6 341 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 RAB42Q8N4Z0 105 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 CISD2Q8N5K1 135 aaKnown RBP14.82□□□□□ -0.04
SKA3-204ENST00000462482 LRRC57Q8N9N7 239 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 OR52K1Q8NGK4 314 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 OR6P1Q8NGX9 317 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 HDAC10Q969S8 669 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 NACC2Q96BF6 587 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 SNRNP40Q96DI7 357 aaKnown RBP14.82□□□□□ -0.04
SKA3-204ENST00000462482 LACRTQ9GZZ8 138 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 EURLQ9NYK6 297 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 SLC39A10Q9ULF5 831 aa14.82□□□□□ -0.04
SKA3-204ENST00000462482 COPG1Q9Y678 874 aaKnown RBP14.82□□□□□ -0.04
SKA3-204ENST00000462482 USP9YO00507 2555 aaPredicted RBP14.81□□□□□ -0.04
SKA3-204ENST00000462482 A1L4Q6 167 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 BHMG1C9JSJ3 638 aaPredicted RBP14.81□□□□□ -0.04
SKA3-204ENST00000462482 KRT86O43790 486 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 MAGP20916 626 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 ADRA1DP25100 572 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 PSMA3P25788 255 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 ITGA3P26006 1051 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 FDFT1P37268 417 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 GABRA4P48169 554 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 AIMP2Q13155 320 aaKnown RBP14.81□□□□□ -0.04
SKA3-204ENST00000462482 NR6A1Q15406 480 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 ZC3H12BQ5HYM0 836 aaKnown RBP14.81□□□□□ -0.04
SKA3-204ENST00000462482 IGFL3Q6UXB1 125 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 TTLL10Q6ZVT0 673 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 MCATQ8IVS2 390 aaKnown RBP14.81□□□□□ -0.04
SKA3-204ENST00000462482 DCUN1D3Q8IWE4 304 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 TTC29Q8NA56 475 aaPredicted RBP14.81□□□□□ -0.04
SKA3-204ENST00000462482 OR4L1Q8NH43 312 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 CFAP61Q8NHU2 1237 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 SLC35B2Q8TB61 432 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 AGPAT4Q9NRZ5 378 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 ASF1BQ9NVP2 202 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 CDC23Q9UJX2 597 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 RIMKLBQ9ULI2 386 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 MRFAP1Q9Y605 127 aa14.81□□□□□ -0.04
SKA3-204ENST00000462482 COL12A1Q99715 3063 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 A0A1B0GX78 115 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 H3BMH7 237 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 AGPSO00116 658 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 OR1I1O60431 355 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms