RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CAPN3P20807 821 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 AOAHP28039 575 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 KRT20P35900 424 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 ETV4P43268 484 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 HAAOP46952 286 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CCR5P51681 352 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 PFN3P60673 137 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.79
USP39-210ENST00000459775 PRKG2Q13237 762 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 POMZP3Q6PJE2 187 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 RPS27LQ71UM5 84 aaKnown RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 ISCA2Q86U28 154 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 LMNTD1Q8N9Z9 388 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CCDC63Q8NA47 563 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CFAP61Q8NHU2 1237 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CCL4L1Q8NHW4 92 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 SKA2Q8WVK7 121 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 DLG3Q92796 817 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 TSPAN17Q96FV3 270 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 NCOR1P1Q9H4R4 102 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 ZNF395Q9H8N7 513 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 NMRAL1Q9HBL8 299 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CYP4F12Q9HCS2 524 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 PRMT8Q9NR22 394 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 PHPT1Q9NRX4 125 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 XPR1Q9UBH6 696 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 GIMAP2Q9UG22 337 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 PSMD13Q9UNM6 376 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CDYLQ9Y232 598 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 NCF1BA6NI72 391 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 NCF1CA8MVU1 366 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 J3KRW8 73 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 NUAK1O60285 661 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 LTA4HP09960 611 aaKnown RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 NCF1P14598 390 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 ITPKAP23677 461 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 RPL10P27635 214 aaKnown RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 HOXC12P31275 282 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 AKT2P31751 481 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 GNPDA1P46926 289 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 PRLHRP49683 370 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 ABRQ12979 859 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 C18orf21Q32NC0 220 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 LRRC8EQ6NSJ5 796 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 ZCCHC23Q6ZST2 131 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 SLC15A3Q8IY34 581 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 NETO1Q8TDF5 533 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 INPP5DQ92835 1189 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 ESAMQ96AP7 390 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CCM2Q9BSQ5 444 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 C1QTNF7Q9BXJ2 289 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 SERHL2Q9H4I8 314 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 RASSF1Q9NS23 344 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 INTS9Q9NV88 658 aaKnown RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 ZIM2Q9NZV7 527 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 DCDC2Q9UHG0 476 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 PAIP2BQ9ULR5 123 aaKnown RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 CORO1CQ9ULV4 474 aaPredicted RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 SMG5Q9UPR3 1016 aaKnown RBP10.09□□□□□ -0.79
USP39-210ENST00000459775 KCNK6Q9Y257 313 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 GPSM3Q9Y4H4 160 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 KNL1Q8NG31 2342 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 SPTBN4Q9H254 2564 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 A0A087X1B8 175 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 LRRC14BA6NHZ5 514 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 PRAMEF26H0Y7S4 382 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 CACNB4O00305 520 aaPredicted RBP10.08□□□□□ -0.8
USP39-210ENST00000459775 BTN3A1O00481 513 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 CHUKO15111 745 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 GRID2O43424 1007 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 GLRA3O75311 464 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 CELA2BP08218 269 aaPredicted RBP10.08□□□□□ -0.8
USP39-210ENST00000459775 ATP6V1B1P15313 513 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 AK4P27144 223 aaPredicted RBP10.08□□□□□ -0.8
USP39-210ENST00000459775 HOXD12P35452 270 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 CCR10P46092 362 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 IL2P60568 153 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 LPAL2Q16609 132 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 ZNF658BQ4V348 819 aaPredicted RBP10.08□□□□□ -0.8
USP39-210ENST00000459775 CYHR1Q6ZMK1 362 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 MBOAT1Q6ZNC8 495 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 ATG14Q6ZNE5 492 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 C10orf107Q8IVU9 208 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 SFTPA2Q8IWL1 248 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 RGL4Q8IZJ4 473 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 ZBTB44Q8NCP5 570 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 ASB12Q8WXK4 309 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 FSCN3Q9NQT6 498 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 TMEM74BQ9NUR3 256 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 NKIRAS1Q9NYS0 192 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 ADAM21Q9UKJ8 722 aa10.08□□□□□ -0.8
USP39-210ENST00000459775 CFAP20Q9Y6A4 193 aaKnown RBP10.08□□□□□ -0.8
USP39-210ENST00000459775 PTPRZ1P23471 2315 aaPredicted RBP10.08□□□□□ -0.8
USP39-210ENST00000459775 EML5Q05BV3 1969 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 PRAMEF33A0A0G2JMD5 474 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 MEI4A8MW99 385 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 TARM1B6A8C7 271 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 G3V2L1 256 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 UBXN8O00124 270 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 VEGFDO43915 354 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms