RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SPRP35270 261 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 CAPZBP47756 277 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 PMS2P54278 862 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 PPP1CAP62136 330 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 POU4F1Q01851 419 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 TRA2AQ13595 282 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 COL9A2Q14055 689 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 PLCL1Q15111 1095 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 ERCC6LQ2NKX8 1250 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 MAP9Q49MG5 647 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 CCSMST1Q4G0I0 132 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 KLHL35Q6PF15 583 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 BLOC1S3Q6QNY0 202 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 PIWIL4Q7Z3Z4 852 aaKnown RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 AMIGO1Q86WK6 493 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 PLXDC1Q8IUK5 500 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 CEP97Q8IW35 865 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 DCUN1D3Q8IWE4 304 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 GSPT2Q8IYD1 628 aaKnown RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 ADGRF3Q8IZF5 1079 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 RCBTB1Q8NDN9 531 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 SKA2Q8WVK7 121 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 UBXN4Q92575 508 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 DLG3Q92796 817 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 LIN37Q96GY3 246 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 PDLIM5Q96HC4 596 aaKnown RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 PRR11Q96HE9 360 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 ELMO2Q96JJ3 720 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 FOPNLQ96NB1 174 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 GPR22Q99680 433 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 NRSN2Q9GZP1 204 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 SRMSQ9H3Y6 488 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 XKR8Q9H6D3 395 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 ICKQ9UPZ9 632 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 DMXL2Q8TDJ6 3036 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 MN1Q10571 1320 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 LAMA5O15230 3695 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 A8MU76 341 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 ARHGEF33A8MVX0 844 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 BTN3A1O00481 513 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 HGSO14964 777 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-206ENST00000457035 RIPK2O43353 540 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 KIF1CO43896 1103 aaKnown RBP9.74□□□□□ -0.85
ATG4A-206ENST00000457035 CAPNS1P04632 268 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 RPN2P04844 631 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 ITGA2BP08514 1039 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 ABHD2P08910 425 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 POLR2CP19387 275 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-206ENST00000457035 SAT1P21673 171 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 CCNFP41002 786 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 BDKRB1P46663 353 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 RGS4P49798 205 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 RAB28P51157 221 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 IL2P60568 153 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 VSNL1P62760 191 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 SLC29A2Q14542 456 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 C16orf72Q14CZ0 275 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 RTP5Q14D33 572 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.74□□□□□ -0.85
ATG4A-206ENST00000457035 PHF19Q5T6S3 580 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 WDR93Q6P2C0 686 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 OOSP2Q86WS3 158 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 LMNTD1Q8N9Z9 388 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 LINC01555Q8NAE3 123 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 FBXO15Q8NCQ5 510 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-206ENST00000457035 FLVCR1-AS1Q8TAF5 88 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 UHMK1Q8TAS1 419 aaKnown RBP9.74□□□□□ -0.85
ATG4A-206ENST00000457035 MAGEC3Q8TD91 643 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 ANKRD49Q8WVL7 239 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 SLC44A1Q8WWI5 657 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 RAD51AP1Q96B01 352 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 ZDHHC12Q96GR4 267 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 CCDC74BQ96LY2 380 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 TGM7Q96PF1 710 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 CAB39LQ9H9S4 337 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 OR6C2Q9NZP2 312 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 TXNDC16Q9P2K2 825 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.74□□□□□ -0.85
ATG4A-206ENST00000457035 CIDEBQ9UHD4 219 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 SLC39A10Q9ULF5 831 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 PLAGL1Q9UM63 463 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 V9GYY5 206 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-206ENST00000457035 SDK2Q58EX2 2172 aa9.74□□□□□ -0.85
ATG4A-206ENST00000457035 ANKRD11Q6UB99 2663 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 ZZEF1O43149 2961 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 A0A087WUV0 522 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 CCDC187A0A096LP49 1063 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PMS2P1A4D2B8 440 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 KRT87PA6NCN2 255 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 MYO1CO00159 1063 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 TAF4O00268 1085 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 RASGRF2O14827 1237 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 TOX3O15405 576 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 ZBTB14O43829 449 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PRICKLE3O43900 615 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 CHRM5P08912 532 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 ANKRD34CP0C6C1 535 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 ZNF37AP17032 561 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 GCAP28676 217 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms