RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 ITGB6P18564 788 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 DGKAP23743 735 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 DUSP4Q13115 394 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 RNF219Q5W0B1 726 aaPredicted RBP17.3■□□□□ 0.36
PTPN6-204ENST00000456013 METTL2BQ6P1Q9 378 aaKnown RBP17.3■□□□□ 0.36
PTPN6-204ENST00000456013 SHQ1Q6PI26 577 aaKnown RBP17.3■□□□□ 0.36
PTPN6-204ENST00000456013 RSPO2Q6UXX9 243 aaPredicted RBP17.3■□□□□ 0.36
PTPN6-204ENST00000456013 SERPINA9Q86WD7 417 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 HOMEZQ8IX15 550 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 OR7A2PQ8NGA2 310 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 LKAAEAR1Q8TD35 194 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 MCOLN3Q8TDD5 553 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 USP7Q93009 1102 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 TAMM41Q96BW9 452 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 TBC1D20Q96BZ9 403 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 NECTIN3Q9NQS3 549 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 FBXO10Q9UK96 956 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 INTS6Q9UL03 887 aaKnown RBP17.3■□□□□ 0.36
PTPN6-204ENST00000456013 A0A096LPI6 279 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 A0A1B0GVM2 712 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 TSPAN3O60637 253 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 JUNDP17535 347 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 GGT5P36269 586 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 HPCAL1P37235 193 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 MAGEA2P43356 314 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 HUNKP57058 714 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 PHC1P78364 1004 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 FAM189BP81408 668 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 TWF1Q12792 350 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 KCNA10Q16322 511 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 PHKG1Q16816 387 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 CPZQ66K79 652 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 C10orf111Q8N326 155 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 LINC01599Q8WXQ3 324 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 RORBQ92753 470 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 REXO5Q96IC2 774 aaKnown RBP17.3■□□□□ 0.36
PTPN6-204ENST00000456013 TTLL2Q9BWV7 592 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 APOL5Q9BWW9 433 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 GABARAPL1Q9H0R8 117 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 TNKS2Q9H2K2 1166 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 SERHLQ9NQF3 203 aa17.3■□□□□ 0.36
PTPN6-204ENST00000456013 TRMT13Q9NUP7 481 aaKnown RBP17.3■□□□□ 0.36
PTPN6-204ENST00000456013 KRBA1A5PL33 1030 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 LOC730098B7Z3J9 87 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 ARVCFO00192 962 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 GJB5O95377 273 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 FTH1P02794 183 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 BCKDHAP12694 445 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 IGFBP5P24593 272 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 RPS3AP61247 264 aaKnown RBP17.29■□□□□ 0.36
PTPN6-204ENST00000456013 SGO1Q5FBB7 561 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 CES5AQ6NT32 575 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 TMEM132CQ8N3T6 1108 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 MINDY2Q8NBR6 621 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 ZNF641Q96N77 438 aaPredicted RBP17.29■□□□□ 0.36
PTPN6-204ENST00000456013 BOCQ9BWV1 1114 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 NACA2Q9H009 215 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 DUSP21Q9H596 190 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 ATAD3AQ9NVI7 634 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 GIN1Q9NXP7 522 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 VNN3Q9NY84 501 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 LHX3Q9UBR4 397 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 PCDHB9Q9Y5E1 797 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 HSPE1-MOB4S4R3N1 261 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 PER2O15055 1255 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 SLC25A14O95258 325 aaPredicted RBP17.29■□□□□ 0.36
PTPN6-204ENST00000456013 CELF2O95319 508 aaKnown RBP17.29■□□□□ 0.36
PTPN6-204ENST00000456013 KLKB1P03952 638 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 ALDH2P05091 517 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 HOXB9P17482 250 aaPredicted RBP17.29■□□□□ 0.36
PTPN6-204ENST00000456013 SMARCB1Q12824 385 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 CXorf57Q6NSI4 855 aaKnown RBP17.29■□□□□ 0.36
PTPN6-204ENST00000456013 LINGO4Q6UY18 593 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 CYP4Z1Q86W10 505 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 ZDHHC21Q8IVQ6 265 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 RBFAQ8N0V3 343 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 TTC16Q8NEE8 873 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 CLHC1Q8NHS4 586 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 YIPF6Q96EC8 236 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 SLC29A3Q9BZD2 475 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 CWH43Q9H720 699 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 ERVK-18Q9QC07 812 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 WDR37Q9Y2I8 494 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 TPRKBQ9Y3C4 175 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 MICAL3Q7RTP6 2002 aa17.29■□□□□ 0.36
PTPN6-204ENST00000456013 ZNF106Q9H2Y7 1883 aaKnown RBP17.28■□□□□ 0.36
PTPN6-204ENST00000456013 GAPDHSO14556 408 aaPredicted RBP17.28■□□□□ 0.36
PTPN6-204ENST00000456013 WNT9AO14904 365 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 MITFO75030 526 aaPredicted RBP17.28■□□□□ 0.36
PTPN6-204ENST00000456013 ARHGEF15O94989 841 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 EPB42P16452 691 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 ATF6P18850 670 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 CD6P30203 668 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 CA5AP35218 305 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 CLDN8P56748 225 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 CXCR4P61073 352 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 RPS14P62263 151 aaKnown RBP17.28■□□□□ 0.36
PTPN6-204ENST00000456013 SLC35A2P78381 396 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 ABHD18Q0P651 414 aa17.28■□□□□ 0.36
PTPN6-204ENST00000456013 KEAP1Q14145 624 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms