RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 GTF2H3Q13889 308 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SPARCL1Q14515 664 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 PRKD1Q15139 912 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC1A5Q15758 541 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 RPE65Q16518 533 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 TAZQ16635 292 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 FNBP1LQ5T0N5 605 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 GPRC6AQ5T6X5 926 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 LRRC38Q5VT99 294 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 FAM69BQ5VUD6 431 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 LCN10Q6JVE6 187 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 PWWP2BQ6NUJ5 590 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 AADACL2Q6P093 401 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 DUS1LQ6P1R4 473 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 GLT6D1Q7Z4J2 308 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 AMZ2Q86W34 360 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 CCDC50Q8IVM0 306 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 RHOT2Q8IXI1 618 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 RCOR2Q8IZ40 523 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ESX1Q8N693 406 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 LILRA3Q8N6C8 439 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF655Q8N720 491 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 OR4E2Q8NGC2 313 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 GPR150Q8NGU9 434 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 C9orf43Q8TAL5 461 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF398Q8TD17 642 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 APOBEC4Q8WW27 367 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 KRT35Q92764 455 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 P3H4Q92791 437 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 KISS1RQ969F8 398 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 KIAA1143Q96AT1 154 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 STAMBPL1Q96FJ0 436 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 CATSPER2Q96P56 530 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 FCRL5Q96RD9 977 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 MAP3K3Q99759 626 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 GORASP1Q9BQQ3 440 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ZPBPQ9BS86 351 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 TIMM29Q9BSF4 260 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 DHRS4Q9BTZ2 278 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 FICDQ9BVA6 458 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 CDADC1Q9BWV3 514 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 WWP1Q9H0M0 922 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ADNPQ9H2P0 1102 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 FAM96AQ9H5X1 160 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 UCK1Q9HA47 277 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 AP5S1Q9NUS5 200 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 IMP3Q9NV31 184 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SIDT1Q9NXL6 827 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 DDX56Q9NY93 547 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 PRR13Q9NZ81 148 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 IL17CQ9P0M4 197 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 KLHL8Q9P2G9 620 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 NDOR1Q9UHB4 597 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 LNPEPQ9UIQ6 1025 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 TLK1Q9UKI8 766 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 PLAAQ9Y263 795 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 TP53TG5Q9Y2B4 290 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 TRAF6Q9Y4K3 522 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 PCDHA13Q9Y5I0 950 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 DUSP10Q9Y6W6 482 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 TLN1Q9Y490 2541 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SVILO95425 2214 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SCN2AQ99250 2005 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 RP1L1Q8IWN7 2480 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 hCG_1818297A0A087WSY0 165 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 GLYATL1P3A0A0U1RQE8 302 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 UBA6A0AVT1 1052 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 OR6C74A6NCV1 312 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF487B1APH4 448 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 GPR89AB7ZAQ6 455 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 AKR1B15C9JRZ8 316 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 STX7O15400 261 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 MTSS1O43312 755 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 CREG1O75629 220 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 LCA5LO95447 670 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 EPOP01588 193 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 ESR1P03372 595 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 ANKRD34CP0C6C1 535 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 GPR89BP0CG08 455 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 PRSS56P0CW18 603 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 FGF5P12034 268 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TPH1P17752 444 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 VCLP18206 1134 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 NELFEP18615 380 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 POLR2CP19387 275 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 MSH3P20585 1137 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 HALP42357 657 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 CAPZBP47756 277 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 CDKN1CP49918 316 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 CCL11P51671 97 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 PCBP3P57721 371 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 SUMO1P63165 101 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 EGR3Q06889 387 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 SRSF1Q07955 248 aaKnown RBP eCLIP4.57□□□□□ -1.682e-7■■□□□ 12.9
GTF3C3-208ENST00000455546 CHAF1BQ13112 559 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TBX2Q13207 712 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 MPP3Q13368 585 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 XRCC4Q13426 336 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TRIM14Q14142 442 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TFDP2Q14188 446 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms