RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 NKX2-1P43699 371 aaPredicted RBP3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 OR3A1P47881 315 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 AMTP48728 403 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 ATXN3P54252 364 aaPredicted RBP3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 ISL1P61371 349 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 ARF5P84085 180 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 DPTQ07507 201 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 PTGISQ16647 500 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 CA9Q16790 459 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 MCMDC2Q4G0Z9 681 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 MANEAQ5SRI9 462 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 FAM166AQ6J272 317 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 PLXDC2Q6UX71 529 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 LINGO4Q6UY18 593 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 IL17RELQ6ZVW7 336 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 TRAPPC11Q7Z392 1133 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 HDDC3Q8N4P3 179 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 TMEM199Q8N511 208 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 GBGT1Q8N5D6 347 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 ARFGAP1Q8N6T3 406 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 ZBTB44Q8NCP5 570 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 CNNM3Q8NE01 707 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 OR13J1Q8NGT2 312 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 KIAA1524Q8TCG1 905 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 SLC20A1Q8WUM9 679 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 DNAAF4Q8WXU2 420 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 WASF1Q92558 559 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 LPAR1Q92633 364 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 PIGTQ969N2 578 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 TXNDC15Q96J42 360 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 SLC25A33Q9BSK2 321 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 TM6SF1Q9BZW5 370 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 VN1R1Q9GZP7 353 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 ZNF701Q9NV72 531 aaPredicted RBP3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 ACTR3BQ9P1U1 418 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 WDR83OSQ9Y284 106 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 SNX9Q9Y5X1 595 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 PTGDR2Q9Y5Y4 395 aa3.98□□□□□ -1.77
HMGN3P1-201ENST00000453847 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 SYCE3A1L190 88 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 KBTBD13C9JR72 458 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 SMPD2O60906 423 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 RFPL2O75678 378 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 GLCEO94923 617 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 BMP10O95393 424 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 CLDN14O95500 239 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 GUCA1CO95843 209 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 PTMAP06454 111 aaKnown RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 HAPLN1P10915 354 aaPredicted RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 GM2AP17900 193 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 CBLP22681 906 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 AHCYP23526 432 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 HOXA11P31270 313 aaPredicted RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 ACVRL1P37023 503 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 MMP15P51511 669 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 TGFB2P61812 414 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 SSBP2P81877 361 aaPredicted RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 HTD2P86397 168 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 GCNT1Q02742 428 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 ZNF155Q12901 538 aaPredicted RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 PDE7AQ13946 482 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 RBMS2Q15434 407 aaKnown RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 PTPN14Q15678 1187 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 NPTX1Q15818 432 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 UGT3A2Q3SY77 523 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 PHLDA2Q53GA4 152 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 TOR1AIP1Q5JTV8 583 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 SPDYCQ5MJ68 293 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 KLC3Q6P597 504 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 TECPR1Q7Z6L1 1165 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 COMMD2Q86X83 199 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 ELMOD2Q8IZ81 293 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 CPSF7Q8N684 471 aaKnown RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 THAP8Q8NA92 274 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 SMRP1Q8NCR6 262 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 NPEPL1Q8NDH3 523 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 MPLKIPQ8TAP9 179 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 RNF128Q8TEB7 428 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 SLC13A3Q8WWT9 602 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 PRCCQ92733 491 aaPredicted RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 P2RX5Q93086 422 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 SCMH1Q96GD3 660 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 RUFY1Q96T51 708 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 SLX1AQ9BQ83 275 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 MMTAG2Q9BU76 263 aaKnown RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 ARRDC1-AS1Q9H2J1 176 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 PRMT8Q9NR22 394 aaPredicted RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 PHPT1Q9NRX4 125 aaPredicted RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 TCP11L1Q9NUJ3 509 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 TAS2R3Q9NYW6 316 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 HMG20BQ9P0W2 317 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 TRMT6Q9UJA5 497 aaKnown RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 CHKBQ9Y259 395 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 TDRKHQ9Y2W6 561 aaKnown RBP3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 TMED3Q9Y3Q3 217 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 KLK4Q9Y5K2 254 aa3.97□□□□□ -1.77
HMGN3P1-201ENST00000453847 INSL5Q9Y5Q6 135 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms