RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 EXD2Q9NVH0 621 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 PCDHGB1Q9Y5G3 927 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 F8W810 466 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TULP3O75386 442 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 DENND5AQ6IQ26 1287 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TP53INP2Q8IXH6 220 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TUBGCP3Q96CW5 907 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMEM209Q96SK2 561 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 ADAM2Q99965 735 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TRIM8Q9BZR9 551 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 OSBPL2Q9H1P3 480 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 SERHL2Q9H4I8 314 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 ERVK-18Q9QC07 812 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TRMT6Q9UJA5 497 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 VPS9D1Q9Y2B5 631 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 OR5K4A6NMS3 321 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TOR1AO14656 332 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 POMCP01189 267 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 USP17L7P0C7H9 530 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TRAPPC2P0DI81 140 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TRAPPC2BP0DI82 140 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 ACVR2AP27037 513 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 BRCC3P46736 316 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 SNRPD2P62316 118 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TUSC3Q13454 348 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 TXNDC11Q6PKC3 985 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 ARSKQ6UWY0 536 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 RBM23Q86U06 439 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 MSANTD3Q96H12 275 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 CYP2S1Q96SQ9 504 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 MLPHQ9BV36 600 aaPredicted RBP13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 COLEC11Q9BWP8 271 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■□□ 17.6
SYNGAP1-204ENST00000449372 RGS18Q9NS28 235 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 CMTM6Q9NX76 183 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 IL20Q9NYY1 176 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 ABCD2Q9UBJ2 740 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 MYO16Q9Y6X6 1858 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 A8MT66 165 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 IFRD1O00458 451 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZNF254O75437 659 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 PAPSS2O95340 614 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 CD36P16671 472 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 MSH3P20585 1137 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 TECRLQ5HYJ1 363 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 PLCZ1Q86YW0 608 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 CENPLQ8N0S6 344 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 OR6P1Q8NGX9 317 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ANKRD49Q8WVL7 239 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMBIM1Q969X1 311 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 NSMCE2Q96MF7 247 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZBTB18Q99592 522 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 OMDQ99983 421 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 MAGEL2Q9UJ55 1249 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 MKLN1Q9UL63 735 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZFC3H1O60293 1989 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 AZIN1O14977 448 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 NDUFA2O43678 99 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ODC1P11926 461 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 CXCR3P49682 368 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 RENBPP51606 427 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAM189BP81408 668 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZNF33BQ06732 778 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 CTBP1Q13363 440 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAM98BQ52LJ0 330 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 SPANXN2Q5MJ10 180 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 CES5AQ6NT32 575 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 LINC00518Q8N0U6 118 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 OR8H2Q8N162 312 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 AMER2Q8N7J2 671 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 TXNDC5Q8NBS9 432 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 PAPD5Q8NDF8 572 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 SUSD3Q96L08 255 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 NUSAP1Q9BXS6 441 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 B3GNT2Q9NY97 397 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 MAP10Q9P2G4 905 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 UBXN8O00124 270 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 MATN3O15232 486 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLC7A4O43246 635 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 AKR7A2O43488 359 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 SNX4O95219 450 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 PGLSO95336 258 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ITGB6P18564 788 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 POU3F3P20264 500 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 DDCP20711 480 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 PIGAP37287 484 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 ACLYP53396 1101 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 CHRNB3Q05901 458 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 DSC1Q08554 894 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 MFSD13AQ14CX5 517 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 VARS2Q5ST30 1063 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 SYT6Q5T7P8 510 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 GLYATQ6IB77 296 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 PCSK9Q8NBP7 692 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 MARC2Q969Z3 335 aa13.18□□□□□ -0.3
SYNGAP1-204ENST00000449372 UROC1Q96N76 676 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms