RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 RPS3P23396 243 aaKnown RBP eCLIP14.45□□□□□ -0.19e-7■□□□□ 8.9
SF1-211ENST00000448404 FASP25445 335 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 PDHA2P29803 388 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 ELMOD1Q8N336 334 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 CPXM2Q8N436 756 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 C2orf73Q8N5S3 287 aaPredicted RBP14.45□□□□□ -0.1
SF1-211ENST00000448404 KNL1Q8NG31 2342 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 ECHDC3Q96DC8 303 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 EFHD1Q9BUP0 239 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 TRIM54Q9BYV2 358 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 RETREG1Q9H6L5 497 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 HEBP1Q9NRV9 189 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 PRKAB1Q9Y478 270 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 TNPO3Q9Y5L0 923 aaKnown RBP14.45□□□□□ -0.1
SF1-211ENST00000448404 U3KQV3 271 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 GRXCR1A8MXD5 290 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 K7ESM1 405 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 IL10P22301 178 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 MAPK10P53779 464 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 INPP5AQ14642 412 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 KIAA0040Q15053 153 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 GDPD4Q6W3E5 623 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 ZBTB46Q86UZ6 589 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 CARM1Q86X55 608 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 HID1Q8IV36 788 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 ITFG1Q8TB96 612 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 SLC13A3Q8WWT9 602 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 SGCDQ92629 289 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 ISG20Q96AZ6 181 aaKnown RBP14.45□□□□□ -0.1
SF1-211ENST00000448404 MED8Q96G25 268 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 ZNF583Q96ND8 569 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 DPY30Q9C005 99 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 MRPL40Q9NQ50 206 aaKnown RBP14.45□□□□□ -0.1
SF1-211ENST00000448404 GPRC5BQ9NZH0 403 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 ZIM2Q9NZV7 527 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 SLC25A13Q9UJS0 675 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 SCN8AQ9UQD0 1980 aa14.45□□□□□ -0.1
SF1-211ENST00000448404 SGTAO43765 313 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 LATS1O95835 1130 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 PRKACGP22612 351 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 HALP42357 657 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 MAGEA10P43363 369 aaPredicted RBP14.44□□□□□ -0.1
SF1-211ENST00000448404 BDKRB1P46663 353 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 CCT8P50990 548 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 FOXD4Q12950 439 aaPredicted RBP14.44□□□□□ -0.1
SF1-211ENST00000448404 CATSPER1Q8NEC5 780 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 GTF2H4Q92759 462 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 RSPRY1Q96DX4 576 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 OR52E6Q96RD3 313 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 UHRF1Q96T88 793 aaPredicted RBP14.44□□□□□ -0.1
SF1-211ENST00000448404 SPHK2Q9NRA0 654 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 ARMC1Q9NVT9 282 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 IFRD1O00458 451 aaPredicted RBP14.44□□□□□ -0.1
SF1-211ENST00000448404 TSPAN6O43657 245 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 GBAP04062 536 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 ASLP04424 464 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 PGRP06401 933 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 CEBPBP17676 345 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 CD22P20273 847 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 CD9P21926 228 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 AOAHP28039 575 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 GNPDA1P46926 289 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 PRMT2P55345 433 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 SULT1C3Q6IMI6 304 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 TRPV3Q8NET8 790 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 BADQ92934 168 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 SAMD11Q96NU1 681 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 CCT7Q99832 543 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 CRISPLD2Q9H0B8 497 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 EXD2Q9NVH0 621 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 ANAPC2Q9UJX6 822 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 PPT2Q9UMR5 302 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 ERVK-11Q9UQG0 969 aa14.44□□□□□ -0.1
SF1-211ENST00000448404 GRM6O15303 877 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 NOBOXO60393 691 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 TNFAIP8O95379 198 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 POP4O95707 220 aaKnown RBP14.43□□□□□ -0.1
SF1-211ENST00000448404 ANXA5P08758 320 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 PABPC4LP0CB38 370 aaKnown RBP14.43□□□□□ -0.1
SF1-211ENST00000448404 BMP2P12643 396 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 MAGEA8P43361 318 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 MAP7Q14244 749 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 MAPKAPK3Q16644 382 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 FAM180BQ6P0A1 224 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 TSPAN14Q8NG11 270 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 ABTB1Q969K4 478 aaPredicted RBP14.43□□□□□ -0.1
SF1-211ENST00000448404 ZUFSPQ96AP4 578 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 ITCHQ96J02 903 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 ADI1Q9BV57 179 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 KCTD5Q9NXV2 234 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 PTPRSQ13332 1948 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 AQP12BA6NM10 295 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 KPNA3O00505 521 aaPredicted RBP14.43□□□□□ -0.1
SF1-211ENST00000448404 ATP1B2P14415 290 aaPredicted RBP14.43□□□□□ -0.1
SF1-211ENST00000448404 CAMK1Q14012 370 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 C16orf72Q14CZ0 275 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.43□□□□□ -0.1
SF1-211ENST00000448404 PPP4R4Q6NUP7 873 aa14.43□□□□□ -0.1
SF1-211ENST00000448404 ZNF551Q7Z340 670 aaPredicted RBP14.43□□□□□ -0.1
SF1-211ENST00000448404 AQP12AQ8IXF9 295 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms