RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PRLHRP49683 370 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 SEC13P55735 322 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 AP1S2P56377 157 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CNTN1Q12860 1018 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 TSTA3Q13630 321 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 PTGR1Q14914 329 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 GRAMD1BQ3KR37 738 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZFP1Q6P2D0 407 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CRTC3Q6UUV7 619 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 NEK10Q6ZWH5 1172 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 ADGRG6Q86SQ4 1221 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 DHFR2Q86XF0 187 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC15A3Q8IY34 581 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 PQLC1Q8N2U9 271 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 LIX1Q8N485 282 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 MINDY1Q8N5J2 469 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 FOPNLQ96NB1 174 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 ECSITQ9BQ95 431 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 GPATCH1Q9BRR8 931 aaKnown RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 PIF1Q9H611 641 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 HEBP1Q9NRV9 189 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 DNAJC11Q9NVH1 559 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 NFKBIL1Q9UBC1 381 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 LEF1Q9UJU2 399 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 HCN2Q9UL51 889 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 TMEM98Q9Y2Y6 226 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 PRKAB1Q9Y478 270 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CCL27Q9Y4X3 112 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 H3BM21 787 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 EEDO75530 441 aaKnown RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 PCDH8O95206 1070 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 GSTM1P09488 218 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC6A2P23975 617 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC6A12P48065 614 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 PFN3P60673 137 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 GSTM4Q03013 218 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CHIT1Q13231 466 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 NAE1Q13564 534 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 GTF2H3Q13889 308 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 RAB30Q15771 203 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 RABL3Q5HYI8 236 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CACHD1Q5VU97 1274 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CES5AQ6NT32 575 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 PRMT9Q6P2P2 845 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 DOK6Q6PKX4 331 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRMT11Q7Z4G4 463 aaKnown RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRIM46Q7Z4K8 759 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZFAND4Q86XD8 727 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CLHC1Q8NHS4 586 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 VCX3BQ9H321 246 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 CMTM6Q9NX76 183 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 THAP10Q9P2Z0 257 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 ATXN10Q9UBB4 475 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 SNX6Q9UNH7 406 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 STON1Q9Y6Q2 735 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 REV3LO60673 3130 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC5A10A0PJK1 596 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 FXYD1O00168 92 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 MID1O15344 667 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 PSIP1O75475 530 aaKnown RBP9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 PAPLNO95428 1278 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 CATP04040 527 aaKnown RBP9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 APODP05090 189 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 PCCBP05166 539 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 LAMP2P13473 410 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 GRIA2P42262 883 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 GRIA3P42263 894 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRAP1Q12931 704 aaKnown RBP9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 TLR1Q15399 786 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 SFT2D3Q587I9 215 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 XKR6Q5GH73 641 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 AGTRAPQ6RW13 159 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 NUDT18Q6ZVK8 323 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 THOC6Q86W42 341 aaKnown RBP9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 SPPL2CQ8IUH8 684 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 RNF175Q8N4F7 328 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 PLA2G15Q8NCC3 412 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 TSPEARQ8WU66 669 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 USP7Q93009 1102 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 TMEM74Q96NL1 305 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 PKP4Q99569 1192 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZBTB18Q99592 522 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 PKP2Q99959 881 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRMT61BQ9BVS5 477 aaKnown RBP9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 ACPTQ9BZG2 426 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 DPY30Q9C005 99 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZCCHC2Q9C0B9 1178 aaKnown RBP9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 ACTL8Q9H568 366 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRIM39Q9HCM9 518 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 C1orf109Q9NX04 203 aa9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 C6orf203Q9P0P8 240 aaPredicted RBP9.27□□□□□ -0.92
COL6A4P1-201ENST00000446690 PLXNB3Q9ULL4 1909 aa9.27□□□□□ -0.93
COL6A4P1-201ENST00000446690 PRR23AA6NEV1 266 aa9.27□□□□□ -0.93
COL6A4P1-201ENST00000446690 IGLON5A6NGN9 336 aa9.27□□□□□ -0.93
COL6A4P1-201ENST00000446690 POP7O75817 140 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms