RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 UBQLNLQ8IYU4 475 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 C8orf59Q8N0T1 100 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 CARFQ8N187 725 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 C12orf45Q8N5I9 185 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 YIPF7Q8N8F6 280 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 FAM83FQ8NEG4 500 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF680Q8NEM1 530 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 OR5T2Q8NGG2 359 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF431Q8TF32 576 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 SLC7A6Q92536 515 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 OTULINQ96BN8 352 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 FRMD6Q96NE9 622 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TRNT1Q96Q11 434 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 DOK1Q99704 481 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 EIF2AK1Q9BQI3 630 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 DPCDQ9BVM2 203 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 FAM126AQ9BYI3 521 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 TGIF2Q9GZN2 237 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 WNT5BQ9H1J7 359 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 XKR8Q9H6D3 395 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 AAASQ9NRG9 546 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GCNT4Q9P109 453 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 SLCO3A1Q9UIG8 710 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MBD1Q9UIS9 605 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PIN4Q9Y237 131 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 USTQ9Y2C2 406 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CA5BQ9Y2D0 317 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SIPA1L3O60292 1781 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PIPSLA2A3N6 862 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 RHPN2P1A8MT19 583 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 E5RJQ4 531 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 UBXN8O00124 270 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CACNB4O00305 520 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 GNGT2O14610 69 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF197O14709 1029 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DCLK1O15075 740 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DDX3YO15523 660 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 CST8O60676 142 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 AVILO75366 819 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CDC123O75794 336 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 FAM13AO94988 1023 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 VAPBO95292 243 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 LY86O95711 162 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TGM6O95932 706 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CSF2P04141 144 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CSF1RP07333 972 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CYP3A4P08684 503 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 HOXB7P09629 217 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PRKAR1AP10644 381 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 BMP1P13497 986 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CHRNB2P17787 502 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MYF6P23409 242 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CHMP24386 653 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 HMGCLP35914 325 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 STX4Q12846 297 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DUSP4Q13115 394 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 KLF10Q13118 480 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLAMF1Q13291 335 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PTK6Q13882 451 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CAMK1Q14012 370 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FASTKD3Q14CZ7 662 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 NR6A1Q15406 480 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 GRK1Q15835 563 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 BCL7AQ4VC05 210 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 C2CD6Q53TS8 623 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 KIAA1614Q5VZ46 1190 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TCEAL6Q6IPX3 200 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 GDPD3Q7L5L3 318 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NRARPQ7Z6K4 114 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ADGRD2Q7Z7M1 963 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FAM160B2Q86V87 743 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FBXO11Q86XK2 927 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MARCH9Q86YJ5 346 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PCDH20Q8N6Y1 951 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 OR6M1Q8NGM8 313 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 OR13J1Q8NGT2 312 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 OR6B3Q8NGW1 331 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DNAJB8Q8NHS0 232 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 WDR36Q8NI36 951 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 NDNFQ8TB73 568 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SNX33Q8WV41 574 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SHC3Q92529 594 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FOXJ1Q92949 421 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MYLPFQ96A32 169 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ACSF2Q96CM8 615 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 TRMT2BQ96GJ1 504 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 ST6GAL2Q96JF0 529 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PGLYRP2Q96PD5 576 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 LENG8Q96PV6 779 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 KXD1Q9BQD3 176 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ARHGAP9Q9BRR9 750 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TRIM9Q9C026 710 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 BTBD1Q9H0C5 482 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 THAP2Q9H0W7 228 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DCSTAMPQ9H295 470 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TFB2MQ9H5Q4 396 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF395Q9H8N7 513 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 MAGEF1Q9HAY2 307 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DYRK4Q9NR20 520 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms