RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 ARSIQ5FYB1 569 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 RNASEH2BQ5TBB1 312 aaKnown RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 MFSD4BQ5TF39 518 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 RAP1GAP2Q684P5 730 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 SLC6A19Q695T7 634 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 TMEM135Q86UB9 458 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 XYLT1Q86Y38 959 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 HPS6Q86YV9 775 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 CRLF3Q8IUI8 442 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 RHOT1Q8IXI2 618 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 RCOR2Q8IZ40 523 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 CENPSQ8N2Z9 138 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 NXPE1Q8N323 547 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 TRIML2Q8N7C3 387 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 MINDY2Q8NBR6 621 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 TSPAN14Q8NG11 270 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 OR2A12Q8NGT7 310 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 EXD1Q8NHP7 514 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 FBXO27Q8NI29 283 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 ZNF420Q8TAQ5 688 aaPredicted RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 SLC20A1Q8WUM9 679 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 ASB12Q8WXK4 309 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 PNPLA2Q96AD5 504 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 SNRNP40Q96DI7 357 aaKnown RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 CMTM5Q96DZ9 223 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 ALG14Q96F25 216 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 TRIM11Q96F44 468 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 PLEKHA8Q96JA3 519 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 BTN2A3PQ96KV6 586 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 DOK1Q99704 481 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 DPYSL5Q9BPU6 564 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 PSD2Q9BQI7 771 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 C1QTNF2Q9BXJ5 285 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 FRMD8P1Q9BZ68 369 aaPredicted RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 DPEP2Q9H4A9 486 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 UBE2TQ9NPD8 197 aaPredicted RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 CHST11Q9NPF2 352 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 ATAD3AQ9NVI7 634 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 ASF1BQ9NVP2 202 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 KLQ9UEF7 1012 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 XPO7Q9UIA9 1087 aaKnown RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 NOCTQ9UK39 431 aaKnown RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 PNMA8BQ9ULN7 279 aaPredicted RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 PRPF19Q9UMS4 504 aaKnown RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 POMPQ9Y244 141 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 FRMD4BQ9Y2L6 1034 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 PCDHGB7Q9Y5F8 929 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 SLC30A1Q9Y6M5 507 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 DOCK4Q8N1I0 1966 aa6.34□□□□□ -1.39
HDAC6-210ENST00000441703 ANKHD1Q8IWZ3 2542 aaKnown RBP6.34□□□□□ -1.39
HDAC6-210ENST00000441703 H3BNH8 94 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 LSM1O15116 133 aaKnown RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 B4GAT1O43505 415 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 TSPAN6O43657 245 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 LIASO43766 372 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 SPAG6O75602 509 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 LEFTY1O75610 366 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PROSCO94903 275 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 H6PDO95479 791 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 OXSR1O95747 527 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 FUCA1P04066 466 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 SRCP12931 536 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 LCP1P13796 627 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 F8A1P23610 371 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 NFKBIAP25963 317 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 SSTR2P30874 369 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 L1CAMP32004 1257 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PTPN7P35236 360 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 SERPINB6P35237 376 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 STT3AP46977 705 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 ITGA1P56199 1179 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 SRP54P61011 504 aaKnown RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 ESRRGP62508 458 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 FMO1Q01740 532 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PPP3CAQ08209 521 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 STX3Q13277 289 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 SPCS2Q15005 226 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 LRRC36Q1X8D7 754 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 ALG11Q2TAA5 492 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 VWA2Q5GFL6 755 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 RABGAP1LQ5R372 815 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 KRT39Q6A163 491 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 IYDQ6PHW0 289 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 FRA10AC1Q70Z53 315 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 ARCQ7LC44 396 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 LYSMD3Q7Z3D4 306 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 TAC4Q86UU9 113 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 GPR180Q86V85 440 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 CIR1Q86X95 450 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 IQCF2Q8IXL9 164 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 CISD2Q8N5K1 135 aaKnown RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 Q8NA96 180 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PDPRQ8NCN5 879 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 OR4D9Q8NGE8 314 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PPP4R1Q8TF05 950 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 TRUB1Q8WWH5 349 aaKnown RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 SLC44A1Q8WWI5 657 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 ATG4AQ8WYN0 398 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 DLG3Q92796 817 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms