RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 E7EQ34 232 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 RASGRF2O14827 1237 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 ATXN7O15265 892 aaPredicted RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 ZBTB14O43829 449 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CPNE3O75131 537 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SCRG1O75711 98 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SEC31AO94979 1220 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 C1orf105O95561 183 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CATP04040 527 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 TUBB4AP04350 444 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 ITGB2P05107 769 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 MSL3P1P0C860 447 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 MPC1LP0DKB6 136 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CBSLP0DN79 551 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 ENO3P13929 434 aaPredicted RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 LIFP15018 202 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 ST6GAL1P15907 406 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 UGT2B7P16662 529 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 ZNF28P17035 718 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 TCN2P20062 427 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 PKLRP30613 574 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CBSP35520 551 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 DLSTP36957 453 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 HSD17B2P37059 387 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SKIV2L2P42285 1042 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SLC1A2P43004 574 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CARSP49589 748 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CRYMQ14894 314 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SF1Q15637 639 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 GPR19Q15760 415 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 KLHL38Q2WGJ6 581 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 LRRC8EQ6NSJ5 796 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 PWWP2BQ6NUJ5 590 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CNSTQ6PJW8 725 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 KIAA0408Q6ZU52 694 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 NEK10Q6ZWH5 1172 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 PALM2Q8IXS6 379 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 OR2L8Q8NGY9 312 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SEC14L1Q92503 715 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CERS2Q96G23 380 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SLC45A3Q96JT2 553 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 OR2A14Q96R47 310 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 TRIM56Q9BRZ2 755 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 TRIM51Q9BSJ1 452 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 CHRNA10Q9GZZ6 450 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 RAB17Q9H0T7 212 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 LHX9Q9NQ69 397 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 FAM114A2Q9NRY5 505 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SPATA7Q9P0W8 599 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 ZC3H7BQ9UGR2 993 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 RALYQ9UKM9 306 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 PLAGL1Q9UM63 463 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 SNX24Q9Y343 169 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 DHRS7Q9Y394 339 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 UTP11Q9Y3A2 253 aaKnown RBP10.12□□□□□ -0.79
MCF2L-216ENST00000439475 PCDHGA4Q9Y5G9 962 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 AP1M2Q9Y6Q5 423 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 EPG5Q9HCE0 2579 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 C21orf140B9A014 251 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 TMEM150CB9EJG8 249 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 EIF3FO00303 357 aaPredicted RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 KATNA1O75449 491 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 HAUS5O94927 633 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 NTRK1P04629 796 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ERVK-10P10266 1014 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 SFTPCP11686 197 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 CYP2A7P20853 494 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 AGXTP21549 392 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 OAS2P29728 719 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ELK3P41970 407 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 STAT5AP42229 794 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 RGS4P49798 205 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ITGA1P56199 1179 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 RPS15P62841 145 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ILF2Q12905 390 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 PDIA2Q13087 525 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 SRSF6Q13247 344 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 NAA25Q14CX7 972 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 SOWAHCQ53LP3 525 aaPredicted RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ACSBG2Q5FVE4 666 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ZNF789Q5FWF6 425 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ZC3H12BQ5HYM0 836 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 KIAA1614Q5VZ46 1190 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 C19orf47Q8N9M1 422 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 C2CD4AQ8NCU7 369 aaPredicted RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 OR9A1PQ8NGU1 263 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 DENND1AQ8TEH3 1009 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ZUFSPQ96AP4 578 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 FAM136AQ96C01 138 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 CLIP3Q96DZ5 547 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 CFAP36Q96G28 342 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 PPM1MQ96MI6 270 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 LRFN5Q96NI6 719 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 ERP44Q9BS26 406 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 AARSD1Q9BTE6 412 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 FAM117AQ9C073 453 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 IRAK4Q9NWZ3 460 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 SPHK1Q9NYA1 384 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms