RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 IFNL4K9M1U5 179 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 SPINT2O43291 252 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 SEC14L5O43304 696 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 CTSVO60911 334 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 GUCY1B2O75343 617 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 EGFP01133 1207 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 ERVK-10P10266 1014 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 CD1EP15812 388 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 IL4RP24394 825 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 FASLGP48023 281 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 CLK1P49759 484 aaKnown RBP2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 CDH15P55291 814 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 ARL4CP56559 192 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 SRSF5Q13243 272 aaKnown RBP2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 NFIL3Q16649 462 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 FHL5Q5TD97 284 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 ATG16L1Q676U5 607 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 FAM53AQ6NSI3 398 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 SLC22A25Q6T423 547 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF704Q6ZNC4 412 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 MCEMP1Q8IX19 187 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 BEST3Q8N1M1 668 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 TDRD5Q8NAT2 981 aaKnown RBP2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 TRPV1Q8NER1 839 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 ACVR1CQ8NER5 493 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 HMGCLL1Q8TB92 370 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 FCAMRQ8WWV6 532 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 TBC1D20Q96BZ9 403 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 RHBDF1Q96CC6 855 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 GRAMD2BQ96HH9 432 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 LURAP1Q96LR2 239 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 MPHOSPH6Q99547 160 aaKnown RBP2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 H2AFJQ9BTM1 129 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 IFIH1Q9BYX4 1025 aaKnown RBP2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 UBXN6Q9BZV1 441 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 INTS2Q9H0H0 1204 aaKnown RBP2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 ITM2CQ9NQX7 267 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 HCN3Q9P1Z3 774 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 PADI3Q9ULW8 664 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 ABCA13Q86UQ4 5058 aa2.65□□□□□ -1.99
HMGB1P18-201ENST00000438801 UBR2Q8IWV8 1755 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 HERC1Q15751 4861 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 RBMY1BA6NDE4 496 aaKnown RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 RBMY1EA6NEQ0 496 aaKnown RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 GAGE10A6NGK3 116 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 EIF3DO15371 548 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 CLDN1O95832 211 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 CD48P09326 243 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 RBMY1DP0C7P1 496 aaKnown RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF23P17027 643 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 HOXC8P31273 242 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 AHRP35869 848 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 PGM1P36871 562 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 GABRB2P47870 512 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 TAS2R38P59533 333 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 PLIN5Q00G26 463 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 FOXD4Q12950 439 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 TECRLQ5HYJ1 363 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 RBMS3Q6XE24 437 aaKnown RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 PQLC2Q6ZP29 291 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 BBS12Q6ZW61 710 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 RRM2BQ7LG56 351 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 SLC34A3Q8N130 599 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 THAP6Q8TBB0 222 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 SLC38A5Q8WUX1 472 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 CCT6BQ92526 530 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 ART5Q96L15 291 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 KLHL5Q96PQ7 755 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 MPHOSPH8Q99549 860 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 EIF2AK1Q9BQI3 630 aaKnown RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 FTOQ9C0B1 505 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 BICC1Q9H694 974 aaKnown RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 SEBOXQ9HB31 216 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 STARD5Q9NSY2 213 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 HSF4Q9ULV5 492 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 A4GNTQ9UNA3 340 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 NIP7Q9Y221 180 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 KLHL20Q9Y2M5 609 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 SCINQ9Y6U3 715 aa2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 PRKDCP78527 4128 aaKnown RBP2.64□□□□□ -1.99
HMGB1P18-201ENST00000438801 DAPK1P53355 1430 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 TEX13CA0A0J9YWL9 993 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 LOC100653049A0A140TA62 436 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 NCAM2O15394 837 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ATP9AO75110 1047 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF821O75541 412 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 KRT34O76011 436 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 PGK1P00558 417 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 CYBAP13498 195 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF26P17031 533 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 PSMC2P35998 433 aaKnown RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ARCN1P48444 511 aaKnown RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ACLYP53396 1101 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 DSCR10P59022 87 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 DEFA6Q01524 100 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 SEMG2Q02383 582 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 CCDC173Q0VFZ6 552 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZFP69Q49AA0 526 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZC2HC1CQ53FD0 456 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 TMEM198Q66K66 360 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms