RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 BTN3A3O00478 584 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PCDHGA12O60330 932 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PEX10O60683 326 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 EEDO75530 441 aaKnown RBP7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SLITRK5O94991 958 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PGK2P07205 417 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 IL32P24001 234 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 RYKP34925 604 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PPP3CCP48454 512 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PIK3CGP48736 1102 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 AP1S2P56377 157 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CARD16Q5EG05 197 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 ARMCX2Q7L311 632 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 VPS37AQ8NEZ2 397 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CLHC1Q8NHS4 586 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PROKR1Q8TCW9 393 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SLC2A14Q8TDB8 520 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CNPPD1Q9BV87 410 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 C12orf10Q9HB07 376 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 AIG1Q9NVV5 245 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 GALPQ9UBC7 116 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 FAM50BQ9Y247 325 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TNRC6CQ9HCJ0 1690 aaKnown RBP7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CLDN24A6NM45 220 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TREHO43280 583 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 ITGB1P05556 798 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 G6PDP11413 515 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 DMC1Q14565 340 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 POU4F3Q15319 338 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 OR4D1Q15615 310 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 C12orf42Q96LP6 360 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 ASB2Q96Q27 587 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 ABCG8Q9H221 673 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 RGS18Q9NS28 235 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 ABCB8Q9NUT2 735 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 MALT1Q9UDY8 824 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 NME7Q9Y5B8 376 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CLDN5O00501 218 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SCAMP3O14828 347 aaKnown RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 KATNA1O75449 491 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PAMP19021 973 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 RPS3P23396 243 aaKnown RBP eCLIP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ICAM3P32942 547 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 MATKP42679 507 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 DAPP51397 102 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 UGT2B15P54855 530 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 HUNKP57058 714 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 NFE2L1Q14494 772 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 DSC3Q14574 896 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 MAD2L1BPQ15013 274 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 DDR2Q16832 855 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 FLYWCH1Q4VC44 716 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SYVN1Q86TM6 617 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SVOPLQ8N434 492 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 STX19Q8N4C7 294 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 OR2T11Q8NH01 316 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 C8orf48Q96LL4 319 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SNTG1Q9NSN8 517 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 MIOSQ9NXC5 875 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 CDV3Q9UKY7 258 aaKnown RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 BPTFQ12830 3046 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PDPK1O15530 556 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ADORA3P0DMS8 318 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 LMO2P25791 158 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 HOXD10P28358 340 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 CCT3P49368 545 aaKnown RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 GMPSP49915 693 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 DGKEP52429 567 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 TARDBPQ13148 414 aaKnown RBP eCLIP7.3□□□□□ -1.247e-7■■■■□ 21.6
CPSF6-202ENST00000435070 NR6A1Q15406 480 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PUS10Q3MIT2 529 aaKnown RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 TMPRSS11AQ6ZMR5 421 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 KCTD20Q7Z5Y7 419 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ADAMTSL2Q86TH1 951 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 C2CD4AQ8NCU7 369 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 GPR83Q9NYM4 423 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 MARCH4Q9P2E8 410 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 MAN2B2Q9Y2E5 1009 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 GRIP1Q9Y3R0 1128 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 KCTD3Q9Y597 815 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 NRCAMQ92823 1304 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 UBA6A0AVT1 1052 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ELOVL7A1L3X0 281 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 DCLK1O15075 740 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 GALNT1Q10472 559 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SLC10A6Q3KNW5 377 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SPDYE7PQ495Y7 208 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SGO1Q5FBB7 561 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 DACT2Q5SW24 774 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 DLEU7Q6UYE1 221 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 RIOX2Q8IUF8 465 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ZDHHC21Q8IVQ6 265 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 LAX1Q8IWV1 398 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ENKURQ8TC29 256 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 OTULINQ96BN8 352 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 RHBDF1Q96CC6 855 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 FRMD6Q96NE9 622 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 KCNC2Q96PR1 638 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 DYRK4Q9NR20 520 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 KRT84Q9NSB2 600 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms