RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SLC2A7Q6PXP3 512 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 MSANTD1Q6ZTZ1 278 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 NEK10Q6ZWH5 1172 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 TAS2R42Q7RTR8 314 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 TRIM46Q7Z4K8 759 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 GOLGA7Q7Z5G4 137 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CIR1Q86X95 450 aaPredicted RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 HIPK1Q86Z02 1210 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CPNE9Q8IYJ1 553 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 RBFAQ8N0V3 343 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ELMOD1Q8N336 334 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 OR2T12Q8NG77 320 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 OR7D4Q8NG98 312 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 OR5K1Q8NHB7 308 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 TBC1D15Q8TC07 691 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 TMBIM1Q969X1 311 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 TMEM74Q96NL1 305 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 SEPHS2Q99611 448 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 TMEM175Q9BSA9 504 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 NTMT1Q9BV86 223 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 MUC3BQ9H195 1237 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 NTN4Q9HB63 628 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 RDH14Q9HBH5 336 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 INTS7Q9NVH2 962 aaKnown RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 IRAK4Q9NWZ3 460 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CLEC1BQ9P126 229 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 C3orf18Q9UK00 162 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 PSME2Q9UL46 239 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CDC14AQ9UNH5 594 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ANGPTL3Q9Y5C1 460 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 SNX5Q9Y5X3 404 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 HSPE1-MOB4S4R3N1 261 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ANKRD36A6QL64 1941 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 SMG1Q96Q15 3661 aaKnown RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 A0A1B0GTL3 188 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 NCF1BA6NI72 391 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 NCF1CA8MVU1 366 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 FAM220BPB1ANY3 271 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 TDRD15B5MCY1 1934 aaKnown RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 EIF3FO00303 357 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 UPK1AO00322 258 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 GNGT2O14610 69 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ENPP3O14638 875 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 FFAR2O15552 330 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 HOXA2O43364 376 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ATE1O95260 518 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 FKBP9O95302 570 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 CCDC159P0C7I6 412 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 PRPS2P11908 318 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 NCF1P14598 390 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 SLC2A4P14672 509 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ACPPP15309 386 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 CRHBPP24387 322 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 NFKBIAP25963 317 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 MAPK1P28482 360 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 PRDX3P30048 256 aaKnown RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 RYKP34925 604 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 HMGCLP35914 325 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ARL1P40616 181 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 AP1S1P61966 158 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 CYP4F3Q08477 520 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 SFSWAPQ12872 951 aaKnown RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 NFATC3Q12968 1075 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 KIAA0040Q15053 153 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 MAPKAPK3Q16644 382 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 EML3Q32P44 896 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 TTLL9Q3SXZ7 439 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 RUNDC3AQ59EK9 446 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 HECTD3Q5T447 861 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 PSAPL1Q6NUJ1 521 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 LETMD1Q6P1Q0 360 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 RTN4RL1Q86UN2 441 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 STK32CQ86UX6 486 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 PIANPQ8IYJ0 282 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ABI1Q8IZP0 508 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 EID3Q8N140 333 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 TCAIMQ8N3R3 496 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 DTWD1Q8N5C7 304 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 PNPLA1Q8N8W4 532 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 SMRP1Q8NCR6 262 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 SETD9Q8NE22 299 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 OR4F6Q8NGB9 312 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 FAM110BQ8TC76 370 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ABTB1Q969K4 478 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 FAM162AQ96A26 154 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 SLC47A1Q96FL8 570 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 CCDC138Q96M89 665 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ZNF583Q96ND8 569 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 MUS81Q96NY9 551 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ACOX2Q99424 681 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 SPSB2Q99619 263 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 SEPT5Q99719 369 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 DPY30Q9C005 99 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 CEP295Q9C0D2 2601 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 PAIP1Q9H074 479 aaKnown RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 CLPBQ9H078 707 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 CCSER2Q9H7U1 834 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 RMND5AQ9H871 391 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms