RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ZRSR2Q15696 482 aaKnown RBP17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 CCDC181Q5TID7 509 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 AGAP7PQ5VUJ5 663 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 PRAMEF13Q5VWM6 474 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 DNAJB14Q8TBM8 379 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 DNAJC1Q96KC8 554 aaKnown RBP17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 CNDP1Q96KN2 507 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 AGAP4Q96P64 663 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 FERMT1Q9BQL6 677 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 CHRNA10Q9GZZ6 450 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 GOLPH3Q9H4A6 298 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 NHEJ1Q9H9Q4 299 aaPredicted RBP17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 PLCL2Q9UPR0 1127 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 MYO7BQ6PIF6 2116 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 MACROD2A1Z1Q3 448 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 GSTM1P09488 218 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 MMP11P24347 488 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 TSFMP43897 325 aaKnown RBP17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 MARCKSL1P49006 195 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 GSTM4Q03013 218 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 MSLNQ13421 630 aaPredicted RBP17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 TRIM14Q14142 442 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 BRD3Q15059 726 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 BBS12Q6ZW61 710 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 KATNAL2Q8IYT4 538 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 RCOR2Q8IZ40 523 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 DNAJC22Q8N4W6 341 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 FLVCR1-AS1Q8TAF5 88 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 COG1Q8WTW3 980 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 DLG3Q92796 817 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 TBL1YQ9BQ87 522 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 UNKQ9C0B0 810 aaKnown RBP17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 SLC22A11Q9NSA0 550 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 OR6C2Q9NZP2 312 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 PLAGL1Q9UM63 463 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 ALG6Q9Y672 507 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 ADGRG4Q8IZF6 3080 aa17.62■□□□□ 0.41
UPK3BP1-201ENST00000428678 CCDC168Q8NDH2 2452 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 TRBV5-4A0A0C4DH59 114 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 ISM1B1AKI9 464 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 APOC4-APOC2K7ER74 178 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 STK10O94804 968 aaKnown RBP17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 APOC2P02655 101 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 EDN3P14138 238 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 SPARCL1Q14515 664 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 ZNF169Q14929 603 aaPredicted RBP17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 ANKRD20A2Q5SQ80 823 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 ANKRD20A1Q5TYW2 823 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 ANKRD20A3Q5VUR7 823 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 TTLL10Q6ZVT0 673 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 TBC1D21Q8IYX1 336 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 FAR1Q8WVX9 515 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 C19orf43Q9BQ61 176 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 EPS8L2Q9H6S3 715 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 ABHD10Q9NUJ1 306 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 SMARCAL1Q9NZC9 954 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 POLG2Q9UHN1 485 aa17.61■□□□□ 0.41
UPK3BP1-201ENST00000428678 A0A1B0GX78 115 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 PRSS44E7EML9 344 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 LIN7AO14910 233 aaPredicted RBP17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 TPM1P09493 284 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 TCEAL1Q15170 157 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 DBN1Q16643 649 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 SLC5A12Q1EHB4 618 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 SYTL3Q4VX76 610 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 SP5Q6BEB4 398 aaPredicted RBP17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 DENND5AQ6IQ26 1287 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 IGFL2Q6UWQ7 119 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 FAM20CQ8IXL6 584 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 PARP9Q8IXQ6 854 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 PIANPQ8IYJ0 282 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 ELMO1Q92556 727 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 FKBP10Q96AY3 582 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 NACC2Q96BF6 587 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 EURLQ9NYK6 297 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 INTUQ9ULD6 942 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 KLHL20Q9Y2M5 609 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 PKDREJQ9NTG1 2253 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 SETD2Q9BYW2 2564 aaPredicted RBP17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 PDZD2O15018 2839 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 DCHS2Q6V1P9 2916 aa17.6■□□□□ 0.41
UPK3BP1-201ENST00000428678 CCDC78A2IDD5 438 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 SOCS6O14544 535 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 KCNN4O15554 427 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 AP2A2O94973 939 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 TPBGLP0DKB5 382 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 PIM1P11309 404 aaPredicted RBP17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 POU3F2P20265 443 aaPredicted RBP17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 ITGAXP20702 1163 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 ACADLP28330 430 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 PEBP1P30086 187 aaKnown RBP17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 KIR2DS3Q14952 304 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 TLR1Q15399 786 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 B3GNTL1Q67FW5 361 aaPredicted RBP17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 FAM180AQ6UWF9 173 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 NAPRTQ6XQN6 538 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 SHISA6Q6ZSJ9 500 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 OVCH1Q7RTY7 1134 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 FJX1Q86VR8 437 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 CDKL3Q8IVW4 592 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms