RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 HIST1H2AHQ96KK5 128 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TSSK3Q96PN8 268 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 DEPDC7Q96QD5 511 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 HIST1H2AJQ99878 128 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 H2AFJQ9BTM1 129 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 EVLQ9UI08 416 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 WBP11Q9Y2W2 641 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CAB39Q9Y376 341 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 PCDHB5Q9Y5E4 795 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 MCM3APO60318 1980 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 hCG_2039718K7EN88 272 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CBX4O00257 560 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 RPLP0P05388 317 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 OR4Q2P0C623 313 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 IDH2P48735 452 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 SLC11A2P49281 568 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 LAPTM4AQ15012 233 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 INAVAQ3KP66 663 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 KIAA1614Q5VZ46 1190 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 AFMIDQ63HM1 303 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 DSG4Q86SJ6 1040 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 SCD5Q86SK9 330 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TSPYL5Q86VY4 417 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 VPS37AQ8NEZ2 397 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 SH3RF2Q8TEC5 729 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 C1QTNF3Q9BXJ4 246 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TMLHEQ9NVH6 421 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 POU2F3Q9UKI9 436 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TESMINQ9Y4I5 508 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 INSIG1O15503 277 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 JRKO75564 520 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ITGALP20701 1170 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TGM1P22735 817 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 IGFBP6P24592 240 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 BEX3Q00994 111 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 KEAP1Q14145 624 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TAF12Q16514 161 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TIGD6Q17RP2 521 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ARMCX4Q5H9R4 360 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 SYT6Q5T7P8 510 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ERICH5Q6P6B1 374 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 GPR149Q86SP6 731 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ANKRD46Q86W74 232 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 GALNT13Q8IUC8 556 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 LACC1Q8IV20 430 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ELMOD1Q8N336 334 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 C3orf58Q8NDZ4 430 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 UTP15Q8TED0 518 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CTRCQ99895 268 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ROGDIQ9GZN7 287 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TRMT13Q9NUP7 481 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 OSER1Q9NX31 292 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CPA4Q9UI42 421 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 PCDHGA10Q9Y5H3 936 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 PSME4Q14997 1843 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CCL15-CCL14A0A0B4J2E2 113 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 FAM220BPB1ANY3 271 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 WISP3O95389 354 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CPSF4O95639 269 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 RHOCP08134 193 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CCL15Q16663 113 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 UPP1Q16831 310 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TEX26Q8N6G2 289 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 OR9Q1Q8NGQ5 310 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 BBS2Q9BXC9 721 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 SLC52A3Q9NQ40 469 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 AASDHPPTQ9NRN7 309 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ADPRHL2Q9NX46 363 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 MIOSQ9NXC5 875 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CRNNQ9UBG3 495 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CRLS1Q9UJA2 301 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 AGO1Q9UL18 857 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ERVW-1Q9UQF0 538 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 RNF6Q9Y252 685 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 E2F3O00716 465 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 PTTG1O95997 202 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 MMP2P08253 660 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 PRPS2P11908 318 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 DOK6Q6PKX4 331 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 CERS6Q6ZMG9 384 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 ST13P5Q8NFI4 369 aaPredicted RBP10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 UROC1Q96N76 676 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 PANX1Q96RD7 426 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 PAAF1Q9BRP4 392 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 MAGEH1Q9H213 219 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 NEK6Q9HC98 313 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 PCDHGB1Q9Y5G3 927 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 FAM47E-STBD1D6RA91 191 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 PCBP2Q15366 365 aaKnown RBP eCLIP10.53□□□□□ -0.722e-8■■■■■ 32.5
ATP2C1-204ENST00000428331 RUNDC3AQ59EK9 446 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF544Q6NX49 715 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 B3GNT8Q7Z7M8 397 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 DEPDC4Q8N2C3 294 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 SPPL2AQ8TCT8 520 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 NELL1Q92832 810 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF566Q969W8 418 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 ACOT13Q9NPJ3 140 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 DYRK4Q9NR20 520 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 EHD3Q9NZN3 535 aa10.53□□□□□ -0.72
ATP2C1-204ENST00000428331 DDNO94850 711 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms