RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PKP4Q99569 1192 aa14.8□□□□□ -0.04
ACTB-204ENST00000425660 DNAJC11Q9NVH1 559 aa14.8□□□□□ -0.04
ACTB-204ENST00000425660 SLC23A2Q9UGH3 650 aa14.8□□□□□ -0.04
ACTB-204ENST00000425660 RNF11Q9Y3C5 154 aa14.8□□□□□ -0.04
ACTB-204ENST00000425660 MYO10Q9HD67 2058 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 IGLV3-19P01714 112 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 HOXC4P09017 264 aaPredicted RBP14.79□□□□□ -0.04
ACTB-204ENST00000425660 CHRNB1P11230 501 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 EZRP15311 586 aaKnown RBP14.79□□□□□ -0.04
ACTB-204ENST00000425660 GPX3P22352 226 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 HMOX2P30519 316 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 BDKRB1P46663 353 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 RAP1GDS1P52306 607 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 ERVK-8P63133 956 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 FASTKQ14296 549 aaKnown RBP14.79□□□□□ -0.04
ACTB-204ENST00000425660 MAPRE2Q15555 327 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 C6orf136Q5SQH8 315 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 IL27RAQ6UWB1 636 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 ZNF852Q6ZMS4 543 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 SCARF2Q96GP6 870 aaPredicted RBP14.79□□□□□ -0.04
ACTB-204ENST00000425660 ZDHHC5Q9C0B5 715 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 ATG10Q9H0Y0 220 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 ACTR8Q9H981 624 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 CD93Q9NPY3 652 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 INTS7Q9NVH2 962 aaKnown RBP14.79□□□□□ -0.04
ACTB-204ENST00000425660 USP36Q9P275 1121 aaKnown RBP14.79□□□□□ -0.04
ACTB-204ENST00000425660 GIMAP2Q9UG22 337 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 PRKAB1Q9Y478 270 aa14.79□□□□□ -0.04
ACTB-204ENST00000425660 KCNE1BA0A087WTH5 132 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 MEI4A8MW99 385 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 CHURC1-FNTBB4DL54 471 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 LSM1O15116 133 aaKnown RBP14.78□□□□□ -0.04
ACTB-204ENST00000425660 PEX11AO75192 247 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 WFS1O76024 890 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 FUCA1P04066 466 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 CEACAM5P06731 702 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 ITGAXP20702 1163 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 ACSL1P33121 698 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 PGM1P36871 562 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 STX1BP61266 288 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 MXRA7P84157 204 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 SLC25A3Q00325 362 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 PLA2G4EQ3MJ16 856 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 ATP6AP1LQ52LC2 224 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 KIAA1324Q6UXG2 1013 aaKnown RBP14.78□□□□□ -0.04
ACTB-204ENST00000425660 SYNPOQ8N3V7 929 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 OR2T34Q8NGX1 318 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 MAGEC3Q8TD91 643 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 BRINP2Q9C0B6 783 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 BTBD1Q9H0C5 482 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 RASSF4Q9H2L5 321 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 ITM2CQ9NQX7 267 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 TMEM45AQ9NWC5 275 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 GPR45Q9Y5Y3 372 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 PRR19A6NJB7 356 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 PRAMEF4O60810 478 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 ULK1O75385 1050 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 MAT2AP31153 395 aaKnown RBP14.78□□□□□ -0.04
ACTB-204ENST00000425660 DGKEP52429 567 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 PRKCQQ04759 706 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 E2F2Q14209 437 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 NUMA1Q14980 2115 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 SMU1Q2TAY7 513 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 PUS10Q3MIT2 529 aaKnown RBP14.78□□□□□ -0.04
ACTB-204ENST00000425660 PRAMEF9Q5VWM5 478 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 SCIMPQ6UWF3 145 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 Q6ZS52 159 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 SYT13Q7L8C5 426 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 FAM124AQ86V42 546 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 THOC6Q86W42 341 aaKnown RBP14.78□□□□□ -0.04
ACTB-204ENST00000425660 FUNDC1Q8IVP5 155 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 SFRP1Q8N474 314 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 ZNF480Q8WV37 535 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 UHRF1Q96T88 793 aaPredicted RBP14.78□□□□□ -0.04
ACTB-204ENST00000425660 TIMM29Q9BSF4 260 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 APOOQ9BUR5 198 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 SGK2Q9HBY8 427 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 TM7SF3Q9NS93 570 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 AIG1Q9NVV5 245 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 CCDC167Q9P0B6 97 aa14.78□□□□□ -0.04
ACTB-204ENST00000425660 NDRG2Q9UN36 371 aaKnown RBP14.78□□□□□ -0.04
ACTB-204ENST00000425660 ZFC3H1O60293 1989 aaKnown RBP14.77□□□□□ -0.04
ACTB-204ENST00000425660 MANBAO00462 879 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 SLC31A1O15431 190 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 LATO43561 262 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 KCNJ13O60928 360 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 KRT6AP02538 564 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 KRT6BP04259 564 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 ITPKAP23677 461 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 KRT6CP48668 564 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 DIO3P55073 304 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 TFF2Q03403 129 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 STX5Q13190 355 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 CUL3Q13618 768 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 LIPJQ5W064 366 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 MIER2Q8N344 545 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 SNX31Q8N9S9 440 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 KYQ8NBH2 561 aa14.77□□□□□ -0.05
ACTB-204ENST00000425660 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.05
ACTB-204ENST00000425660 OR9A1PQ8NGU1 263 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms