RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 TPM1P09493 284 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 FOXN2P32314 431 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 SHMT2P34897 504 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 NSG1P42857 185 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 NKAIN1Q4KMZ8 207 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 TLDC1Q6P9B6 456 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 PACS1Q6VY07 963 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 TAS2R42Q7RTR8 314 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 TICAM1Q8IUC6 712 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 FAM20CQ8IXL6 584 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 ZNF655Q8N720 491 aaPredicted RBP14.42□□□□□ -0.1
ATG4B-209ENST00000425239 LINC01555Q8NAE3 123 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 CLEC1AQ8NC01 280 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 STYXQ8WUJ0 223 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 NACC2Q96BF6 587 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 AP1M1Q9BXS5 423 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 SLC7A5P2Q9GIP4 190 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 VPS37BQ9H9H4 285 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 SMARCAL1Q9NZC9 954 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 POLG2Q9UHN1 485 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 SLC5A6Q9Y289 635 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 ASF1AQ9Y294 204 aa14.42□□□□□ -0.1
ATG4B-209ENST00000425239 ANKUB1A6NFN9 424 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 OR51F1A6NGY5 319 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 AP2A1O95782 977 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 CD63P08962 238 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 FOLR3P41439 243 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 GDF10P55107 478 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 ITIH4Q14624 930 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 SLC9A5Q14940 896 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 KYNUQ16719 465 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 SLC5A12Q1EHB4 618 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 CCDC170Q8IYT3 715 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 LRRC57Q8N9N7 239 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 LMNTD1Q8N9Z9 388 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 PPP1R2P1Q96PQ5 205 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 ANP32EQ9BTT0 268 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 PIH1D1Q9NWS0 290 aaKnown RBP14.41□□□□□ -0.1
ATG4B-209ENST00000425239 EURLQ9NYK6 297 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 IFT80Q9P2H3 777 aaPredicted RBP14.41□□□□□ -0.1
ATG4B-209ENST00000425239 PLAGL1Q9UM63 463 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 REXO2Q9Y3B8 237 aaKnown RBP14.41□□□□□ -0.1
ATG4B-209ENST00000425239 COPG1Q9Y678 874 aaKnown RBP14.41□□□□□ -0.1
ATG4B-209ENST00000425239 ABCA12Q86UK0 2595 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 APCP25054 2843 aa14.41□□□□□ -0.1
ATG4B-209ENST00000425239 AGPSO00116 658 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 SOCS6O14544 535 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 PRICKLE3O43900 615 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-209ENST00000425239 OR1I1O60431 355 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 IGHEP01854 428 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 KLF1Q13351 362 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-209ENST00000425239 POU6F1Q14863 301 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 BRD3Q15059 726 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 FCRL6Q6DN72 434 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 COX15Q7KZN9 410 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 KCNMB4Q86W47 210 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 VRK3Q8IV63 474 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 OR13J1Q8NGT2 312 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 UBE2Q2Q8WVN8 375 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 ELMO1Q92556 727 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 ZNF285Q96NJ3 590 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 SPSB2Q99619 263 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 FERMT1Q9BQL6 677 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 LACRTQ9GZZ8 138 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 SLC26A1Q9H2B4 701 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 ATP13A2Q9NQ11 1180 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 MAP10Q9P2G4 905 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 SRPK3Q9UPE1 567 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 PLCL2Q9UPR0 1127 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 KLHL20Q9Y2M5 609 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 CROCCQ5TZA2 2017 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 FBN2P35556 2912 aa14.4□□□□□ -0.1
ATG4B-209ENST00000425239 CCDC162PA2VCL2 907 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 PEX12O00623 359 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 E2F3O00716 465 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 GPC4O75487 556 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 STK10O94804 968 aaKnown RBP14.39□□□□□ -0.11
ATG4B-209ENST00000425239 IPO13O94829 963 aaKnown RBP14.39□□□□□ -0.11
ATG4B-209ENST00000425239 TJP3O95049 919 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 ALPPP05187 535 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 MAGP20916 626 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 MMP11P24347 488 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 MSNP26038 577 aaKnown RBP14.39□□□□□ -0.11
ATG4B-209ENST00000425239 CCR7P32248 378 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 RWDD2BP57060 319 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 KIR2DS3Q14952 304 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 NKG7Q16617 165 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 LYPLAL1Q5VWZ2 237 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 ZNF449Q6P9G9 518 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 KIRREL2Q6UWL6 708 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 ZNF534Q76KX8 674 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 OVCH1Q7RTY7 1134 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 TMTC1Q8IUR5 882 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 MCATQ8IVS2 390 aaKnown RBP14.39□□□□□ -0.11
ATG4B-209ENST00000425239 FAM71DQ8N9W8 422 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 ST6GALNAC3Q8NDV1 305 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 SLC35B2Q8TB61 432 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 MESP1Q9BRJ9 268 aa14.39□□□□□ -0.11
ATG4B-209ENST00000425239 LRRC40Q9H9A6 602 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms