RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 KLHL32Q96NJ5 620 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ANKRD27Q96NW4 1050 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 BBC3Q96PG8 261 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PANX3Q96QZ0 392 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 TRIB1Q96RU8 372 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SPAG8Q99932 426 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PTDSS2Q9BVG9 487 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 VN1R3Q9BXE9 311 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SPZ1Q9BXG8 430 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 FN3KQ9H479 309 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 GSTO2Q9H4Y5 243 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SYNDIG1Q9H7V2 258 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CXorf36Q9H7Y0 433 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 GBA2Q9HCG7 927 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 VAT1LQ9HCJ6 419 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 KLHL1Q9NR64 748 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 OR6C2Q9NZP2 312 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SPATA7Q9P0W8 599 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SLC25A13Q9UJS0 675 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 FAM240BA0A1B0GVZ2 78 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 ERICH2A1L162 156 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CDHR4A6H8M9 788 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 VGLL3A8MV65 326 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 BECN2A8MW95 431 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 AGPSO00116 658 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 STRNO43815 780 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 SERPINI2O75830 405 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 GNA14O95837 355 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 LGI1O95970 557 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 POMCP01189 267 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 TFP02787 698 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 UGT2B4P06133 528 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 ASNSP08243 561 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 PRKAR1AP10644 381 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CKMT2P17540 419 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CEBPBP17676 345 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 ATP6V1C1P21283 382 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 DRD5P21918 477 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 ANXA13P27216 316 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CD1BP29016 333 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CEBPDP49716 269 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 ENTPD1P49961 510 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CLCN4P51793 760 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 PLTPP55058 493 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CDH13P55290 713 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 PTENP60484 403 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 UBE2IP63279 158 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 RPP38P78345 283 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 MRPS21P82921 87 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 HSF2Q03933 536 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 HSPB3Q12988 150 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 MTAPQ13126 283 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 MAB21L1Q13394 359 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 DRAP1Q14919 205 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CHRNA6Q15825 494 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 STXBP2Q15833 593 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 KLHL40Q2TBA0 621 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 BCL7AQ4VC05 210 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CXorf66Q5JRM2 361 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 C10orf120Q5SQS8 335 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 PHYHD1Q5SRE7 291 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CCNYL2Q5T2Q4 361 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CARD17Q5XLA6 110 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 SFRP4Q6FHJ7 346 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 B3GLCTQ6Y288 498 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 LDB1Q86U70 411 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 GPAT4Q86UL3 456 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 ADIPOR2Q86V24 386 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 SERINC5Q86VE9 423 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 NRROSQ86YC3 692 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 FOXP4Q8IVH2 680 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 MISPQ8IVT2 679 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 EFCAB13Q8IY85 973 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 SLC7A5P1Q8MH63 180 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 DNAAF3Q8N9W5 541 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 KCNH5Q8NCM2 988 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 STKLD1Q8NE28 680 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 DNAAF1Q8NEP3 725 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 OR56A1Q8NGH5 318 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 OR52B4Q8NGK2 314 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 RAB3IL1Q8TBN0 382 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 PAQR8Q8TEZ7 354 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 U2AF1L4Q8WU68 220 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 TSEN15Q8WW01 171 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 RAD54LQ92698 747 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 AZIN2Q96A70 460 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 SLCO4A1Q96BD0 722 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 TMIGD2Q96BF3 282 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 LINGO1Q96FE5 620 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 TRMT61AQ96FX7 289 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 MARS2Q96GW9 593 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 THOC3Q96J01 351 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 VCPIP1Q96JH7 1222 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 ZBTB45Q96K62 511 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 TSPYL1Q9H0U9 437 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 NAPBQ9H115 298 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 KCNK15Q9H427 330 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM231Q9H6L2 316 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 DCTPP1Q9H773 170 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms