RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 EPN3Q9H201 632 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 ACTR5Q9H9F9 607 aaPredicted RBP14.68□□□□□ -0.06
USB1-202ENST00000423271 SYBUQ9NX95 663 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 CIDEBQ9UHD4 219 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 PCYOX1Q9UHG3 505 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 POLG2Q9UHN1 485 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 UBR5O95071 2799 aaPredicted RBP14.68□□□□□ -0.06
USB1-202ENST00000423271 MED13Q9UHV7 2174 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 CCDC188H7C350 402 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 CD3EAPO15446 510 aaKnown RBP14.67□□□□□ -0.06
USB1-202ENST00000423271 GPC4O75487 556 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 RECKO95980 971 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 MGAT1P26572 445 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 PTGIRP43119 386 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 PMS2P54278 862 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 RPS15P62841 145 aaKnown RBP14.67□□□□□ -0.06
USB1-202ENST00000423271 PLOD1Q02809 727 aaPredicted RBP14.67□□□□□ -0.06
USB1-202ENST00000423271 KCNC4Q03721 635 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 PPP1R7Q15435 360 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 UGT8Q16880 541 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 PTCHD3Q3KNS1 767 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 AARS2Q5JTZ9 985 aaKnown RBP14.67□□□□□ -0.06
USB1-202ENST00000423271 IZUMO3Q5VZ72 239 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 CPZQ66K79 652 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 FAM198BQ6UWH4 519 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 CES3Q6UWW8 571 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 SYVN1Q86TM6 617 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 FAM20CQ8IXL6 584 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 SYTL1Q8IYJ3 562 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 ENDOVQ8N8Q3 282 aaKnown RBP14.67□□□□□ -0.06
USB1-202ENST00000423271 ZNF592Q92610 1267 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 CARD6Q9BX69 1037 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 TRIM55Q9BYV6 548 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 IL22Q9GZX6 179 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 CLMPQ9H6B4 373 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 SYTL2Q9HCH5 934 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 ANAPC5Q9UJX4 755 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 FARSAQ9Y285 508 aaKnown RBP14.67□□□□□ -0.06
USB1-202ENST00000423271 RELNP78509 3460 aa14.67□□□□□ -0.06
USB1-202ENST00000423271 A0A0J9YY10 115 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 E7EQ34 232 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 F8W8V4 182 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 PRMT5O14744 637 aaPredicted RBP14.66□□□□□ -0.06
USB1-202ENST00000423271 ZNF749O43361 778 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 RFPL1O75677 317 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 URI1O94763 535 aaPredicted RBP14.66□□□□□ -0.06
USB1-202ENST00000423271 KLK3P07288 261 aaPredicted RBP14.66□□□□□ -0.06
USB1-202ENST00000423271 CAPN1P07384 714 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 CTSBP07858 339 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 TPSB2P20231 275 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 ARNTP27540 789 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 AOAHP28039 575 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 PKLRP30613 574 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 GABRA4P48169 554 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 CSRP3P50461 194 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 ITGA1P56199 1179 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 CHAF1BQ13112 559 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 PTK6Q13882 451 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 GRB7Q14451 532 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 KCNJ11Q14654 390 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 TPSAB1Q15661 275 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 DNAJC21Q5F1R6 531 aaKnown RBP14.66□□□□□ -0.06
USB1-202ENST00000423271 ANKRD22Q5VYY1 191 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 HOOK3Q86VS8 718 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 CFAP61Q8NHU2 1237 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 SLCO2A1Q92959 643 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 MFSD3Q96ES6 412 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 IL17FQ96PD4 163 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 KRT12Q99456 494 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 MENTQ9BUN1 341 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 P2RY12Q9H244 342 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 OR6C2Q9NZP2 312 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 BFARQ9NZS9 450 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 TLK1Q9UKI8 766 aa14.66□□□□□ -0.06
USB1-202ENST00000423271 ISM1B1AKI9 464 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 GOLGA8KD6RF30 607 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 H3BMH7 237 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 MKRN2OSH3BPM6 223 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 GOLGA8TH3BQL2 631 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 KIF2AO00139 706 aaPredicted RBP14.65□□□□□ -0.06
USB1-202ENST00000423271 MAP3K7O43318 606 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 TMEM63AO94886 807 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 PDGFAP04085 211 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 PPARGP37231 505 aaPredicted RBP14.65□□□□□ -0.06
USB1-202ENST00000423271 MAGEA6P43360 314 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 NPY2RP49146 381 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 TTPAP49638 278 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 DR1Q01658 176 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 C2orf54Q08AI8 447 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 ZNF385CQ66K41 422 aaPredicted RBP14.65□□□□□ -0.06
USB1-202ENST00000423271 PTRHD1Q6GMV3 140 aaKnown RBP14.65□□□□□ -0.06
USB1-202ENST00000423271 TAX1BP1Q86VP1 789 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 C2orf73Q8N5S3 287 aaPredicted RBP14.65□□□□□ -0.06
USB1-202ENST00000423271 OTUD6BQ8N6M0 293 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 LINC01555Q8NAE3 123 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 SPATA4Q8NEY3 305 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 ADAMTS17Q8TE56 1095 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 ASZ1Q8WWH4 475 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 RUNDC3BQ96NL0 473 aa14.65□□□□□ -0.06
USB1-202ENST00000423271 TRIM51Q9BSJ1 452 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms