RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 TRIP12Q14669 1992 aaPredicted RBP16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 hCG_2039718K7EN88 272 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 AREL1O15033 823 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 KMOO15229 486 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 MFN2O95140 757 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 KDM4DQ6B0I6 523 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 GATAD2AQ86YP4 633 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 NKAPQ8N5F7 415 aaKnown RBP16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 APH1BQ8WW43 257 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 DNASE1L2Q92874 299 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 CDK5RAP1Q96SZ6 601 aaKnown RBP16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 ZBED2Q9BTP6 218 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 MAGIXQ9H6Y5 334 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 AMBNQ9NP70 447 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 TRPV5Q9NQA5 729 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 FBXL12Q9NXK8 326 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 NDRG4Q9ULP0 352 aaKnown RBP16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 SNX6Q9UNH7 406 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 BOLA1Q9Y3E2 137 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 CCL27Q9Y4X3 112 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 NUP214P35658 2090 aaPredicted RBP16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 LOC100506127A0A0U1RQW1 187 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 A0A1W2PQH9 124 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 A8MV72 311 aaPredicted RBP16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 AP3D1O14617 1153 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 TREHO43280 583 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 FGF1P05230 155 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 PCSK1P29120 753 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 ACVRL1P37023 503 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 CTSL3PQ5NE16 218 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 ATAD3CQ5T2N8 411 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 PSAPL1Q6NUJ1 521 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 PNCKQ6P2M8 343 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 ANKRD46Q86W74 232 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 LIX1Q8N485 282 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 OR10T2Q8NGX3 314 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 CD200R1Q8TD46 325 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 REXO4Q9GZR2 422 aaKnown RBP16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 ANKHQ9HCJ1 492 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 RNF6Q9Y252 685 aa16.31■□□□□ 0.2
NPC1L1-203ENST00000423141 A0A0U1RQS6 177 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 SMIM35A0A1B0GVV1 85 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 RRN3P2A6NIE6 340 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 WASH4PA8MWX3 477 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 IFRD1O00458 451 aaPredicted RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 HAT1O14929 419 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 PER2O15055 1255 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 GPR39O43194 453 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 RECQL5O94762 991 aaPredicted RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 KRT8P05787 483 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 BMP1P13497 986 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 ZNF792Q3KQV3 632 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 AGAP6Q5VW22 663 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 NXNL2Q5VZ03 156 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 SUSD1Q6UWL2 747 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 Q6ZPB1 254 aaPredicted RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 ZNF683Q8IZ20 524 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 OR52E4Q8NGH9 312 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 OR6F1Q8NGZ6 308 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 IGSF8Q969P0 613 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 FAM120BQ96EK7 910 aaKnown RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 AGAP4Q96P64 663 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 OR52E6Q96RD3 313 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 SIGLEC11Q96RL6 698 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 ZBTB18Q99592 522 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 APOL4Q9BPW4 351 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 DPY30Q9C005 99 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 PRDM5Q9NQX1 630 aaPredicted RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 TRMT6Q9UJA5 497 aaKnown RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 HLA-DPA1P20036 260 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 BRCC3P46736 316 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 PPP3CCP48454 512 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 GZMMP51124 257 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 TSPY1Q01534 308 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 SGO1Q5FBB7 561 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 TUBA3EQ6PEY2 450 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 ZNF551Q7Z340 670 aaPredicted RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 SNX20Q7Z614 316 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 C14orf119Q9NWQ9 140 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 C1orf109Q9NX04 203 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 SIRT5Q9NXA8 310 aa16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 PDP1Q9P0J1 537 aaPredicted RBP16.3■□□□□ 0.2
NPC1L1-203ENST00000423141 DOCK4Q8N1I0 1966 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 TRBV5-3A0A0A0MS03 114 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 NOTOA8MTQ0 251 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 FZD9O00144 591 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 ZNF140P52738 457 aaPredicted RBP16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 IL2P60568 153 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 TUBA1BP68363 451 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 SLC14A1Q13336 389 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 PTPRRQ15256 657 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 MS4A13Q5J8X5 152 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 SLX4IPQ5VYV7 408 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 FAM171BQ6P995 826 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 TMC5Q6UXY8 1006 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 TUBA1AQ71U36 451 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms