RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CSE1LP55060 971 aaKnown RBP9.11□□□□□ -0.95
NUP50-205ENST00000419387 HSPA14Q0VDF9 509 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 CHAF1BQ13112 559 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 SEMA3AQ14563 771 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 SIX1Q15475 284 aaPredicted RBP9.11□□□□□ -0.95
NUP50-205ENST00000419387 ZIC1Q15915 447 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 SLC5A12Q1EHB4 618 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 PTCHD3Q3KNS1 767 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 DNAJC21Q5F1R6 531 aaKnown RBP9.11□□□□□ -0.95
NUP50-205ENST00000419387 CPZQ66K79 652 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 DRICH1Q6PGQ1 229 aaPredicted RBP9.11□□□□□ -0.95
NUP50-205ENST00000419387 FAM198BQ6UWH4 519 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 TRIM73Q86UV7 250 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 SLC22A15Q8IZD6 547 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 C19orf47Q8N9M1 422 aaKnown RBP9.11□□□□□ -0.95
NUP50-205ENST00000419387 GLIS1Q8NBF1 620 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 PPHLN1Q8NEY8 458 aaKnown RBP9.11□□□□□ -0.95
NUP50-205ENST00000419387 FLVCR1-AS1Q8TAF5 88 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 ASZ1Q8WWH4 475 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 SLC25A23Q9BV35 468 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 TSSK1BQ9BXA7 367 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 SPRTNQ9H040 489 aaPredicted RBP9.11□□□□□ -0.95
NUP50-205ENST00000419387 CHRAC1Q9NRG0 131 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 SPHK1Q9NYA1 384 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 PLAGL1Q9UM63 463 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 CDYLQ9Y232 598 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 PCDHGA9Q9Y5G4 932 aaKnown RBP9.11□□□□□ -0.95
NUP50-205ENST00000419387 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
NUP50-205ENST00000419387 AP1M2Q9Y6Q5 423 aa9.11□□□□□ -0.95
NUP50-205ENST00000419387 SETXQ7Z333 2677 aaKnown RBP9.1□□□□□ -0.95
NUP50-205ENST00000419387 SPTBP11277 2137 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 IQCF5A8MTL0 148 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 C9J4A7 227 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 H3BMH7 237 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 PRMT5O14744 637 aaPredicted RBP9.1□□□□□ -0.95
NUP50-205ENST00000419387 OR2B3O76000 313 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 TMEM63AO94886 807 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 CBSLP0DN79 551 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 CBSP35520 551 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 PTGIRP43119 386 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 GABRA4P48169 554 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 NPY2RP49146 381 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 TTPAP49638 278 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 MLLT10P55197 1068 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 SESN2P58004 480 aaPredicted RBP9.1□□□□□ -0.95
NUP50-205ENST00000419387 KIR2DS3Q14952 304 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 NCF4Q15080 339 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 KYNUQ16719 465 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 AARS2Q5JTZ9 985 aaKnown RBP9.1□□□□□ -0.95
NUP50-205ENST00000419387 FAM69BQ5VUD6 431 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 ZNF385CQ66K41 422 aaPredicted RBP9.1□□□□□ -0.95
NUP50-205ENST00000419387 C4orf22Q6V702 233 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 VRK3Q8IV63 474 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 DNAJC22Q8N4W6 341 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 ZBTB2Q8N680 514 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 MAIP1Q8WWC4 291 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 C17orf62Q9BQA9 187 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 DHRS4Q9BTZ2 278 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 MLXIPLQ9NP71 852 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 EIF2B3Q9NR50 452 aaKnown RBP9.1□□□□□ -0.95
NUP50-205ENST00000419387 CATSPERZQ9NTU4 200 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 TRMT1Q9NXH9 659 aaKnown RBP9.1□□□□□ -0.95
NUP50-205ENST00000419387 PLAAQ9Y263 795 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 ZKSCAN5Q9Y2L8 839 aa9.1□□□□□ -0.95
NUP50-205ENST00000419387 AP3B1O00203 1094 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 CD3EAPO15446 510 aaKnown RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 HCRTR1O43613 425 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 CEACAM4O75871 244 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 SLCO2B1O94956 709 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 FGGP02679 453 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 RPN2P04844 631 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 APOA4P06727 396 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 CD63P08962 238 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 CD9P21926 228 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 AOAHP28039 575 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 PEBP1P30086 187 aaKnown RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 PKLRP30613 574 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 CD97P48960 835 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 RAB28P51157 221 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 PGDP52209 483 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 BASP1P80723 227 aaKnown RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 DCDP81605 110 aaKnown RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 UBAP2LQ14157 1087 aaKnown RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 SSPNQ14714 243 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 DEFB110Q30KQ9 67 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 MLIPQ5VWP3 458 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 PAPD7Q5XG87 772 aaKnown RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 RHBDD2Q6NTF9 364 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 TLDC1Q6P9B6 456 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 UNC5DQ6UXZ4 953 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 MED25Q71SY5 747 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 GSTA5Q7RTV2 222 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 LDB1Q86U70 411 aaPredicted RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 KRT222Q8N1A0 295 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 TMEM102Q8N9M5 508 aaPredicted RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 LINC01555Q8NAE3 123 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 CFAP61Q8NHU2 1237 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 PROKR1Q8TCW9 393 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 LKAAEAR1Q8TD35 194 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms