RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 NUP85Q9BW27 656 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 MRPL1Q9BYD6 325 aaKnown RBP3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 SHARPINQ9H0F6 387 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 WDR13Q9H1Z4 485 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 OPA3Q9H6K4 179 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 MYNNQ9NPC7 610 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 OLAHQ9NV23 265 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 HAO2Q9NYQ3 351 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 CACNG4Q9UBN1 327 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 IGHV4-4A0A075B6R2 117 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 MEIS2O14770 477 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 RNASEH1O60930 286 aaKnown RBP3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 PSMD10O75832 226 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 SERPINB2P05120 415 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 EDN1P05305 212 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 JAK1P23458 1154 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 SLC6A6P31641 620 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 CLK1P49759 484 aaKnown RBP3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 GCNT1Q02742 428 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 PRKCZQ05513 592 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 SQLEQ14534 574 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 CA9Q16790 459 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 SYT14P1Q58G82 188 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 FBXL22Q6P050 247 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 BRINP3Q76B58 766 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 RTN4RL2Q86UN3 420 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 DCLK2Q8N568 766 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 SYT2Q8N9I0 419 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 TMEM178AQ8NBL3 297 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 EXD1Q8NHP7 514 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZNF653Q96CK0 615 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 GMPPAQ96IJ6 420 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 NSL1Q96IY1 281 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 LINC00615Q96LM1 132 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 GPR88Q9GZN0 384 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 ATP13A3Q9H7F0 1226 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 PLCXD1Q9NUJ7 323 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 ATAD3AQ9NVI7 634 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 RNF186Q9NXI6 227 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 FLRT3Q9NZU0 649 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 CPSF2Q9P2I0 782 aaKnown RBP3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 PADI2Q9Y2J8 665 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 FAM169AQ9Y6X4 670 aa3.92□□□□□ -1.78
HMGB1P49-201ENST00000418882 CACNA1FO60840 1977 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 A0A087WW49 117 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 hCG_1809904A0A1W2PP81 198 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 A0A1W2PPE2 198 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 A0A1W2PR64 198 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 MSGN1A6NI15 193 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 KRTAP16-1A8MUX0 517 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 K7ENM7 598 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 DDHD2O94830 711 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 STARD3NLO95772 234 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 HMBSP08397 361 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 IGHV4-31P0DP07 118 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 CYP11B2P19099 503 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 TAF10Q12962 218 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 RRS1Q15050 365 aaKnown RBP3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 ELFN2Q5R3F8 820 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 C6orf163Q5TEZ5 329 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 PLPPR4Q7Z2D5 763 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 EID3Q8N140 333 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZNF611Q8N823 705 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 PHLDA1Q8WV24 401 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 TEKT4Q8WW24 435 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 SSMEM1Q8WWF3 244 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 DHX58Q96C10 678 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZNF599Q96NL3 588 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 RAD9AQ99638 391 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 CCDC106Q9BWC9 280 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 APOL6Q9BWW8 343 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 WNT5BQ9H1J7 359 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 FBXO2Q9UK22 296 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 RNF150Q9ULK6 438 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 NME7Q9Y5B8 376 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 TRPV2Q9Y5S1 764 aa3.91□□□□□ -1.78
HMGB1P49-201ENST00000418882 TRIM77I1YAP6 450 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 TSPAN1O60635 241 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 KHDRBS3O75525 346 aaKnown RBP3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 HAPLN1P10915 354 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 AKR1B1P15121 316 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 CEBPBP17676 345 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 MAGEA11P43364 429 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 SLC9A3P48764 834 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 VEGFCP49767 419 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 LIG4P49917 911 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 KCNJ10P78508 379 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 PPARDQ03181 441 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 HERC3Q15034 1050 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 ARHGAP22Q7Z5H3 698 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 CAMKMTQ7Z624 323 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 PPFIBP2Q8ND30 876 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 MAPK1IP1LQ8NDC0 245 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 SYN2Q92777 582 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 FAM20AQ96MK3 541 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 OR2B2Q9GZK3 357 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 EGLN1Q9GZT9 426 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 ANKZF1Q9H8Y5 726 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 ERVMER34-1Q9H9K5 563 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms