RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 DHX34Q14147 1143 aaKnown RBP15.91■□□□□ 0.14
LINC00404-201ENST00000418660 GRB7Q14451 532 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 DEFB109BQ30KR1 87 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 ATP1A1-AS1Q5TC04 95 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 PRAMEF17Q5VTA0 474 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 TTC23LQ6PF05 361 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 ZNF517Q6ZMY9 492 aaPredicted RBP15.91■□□□□ 0.14
LINC00404-201ENST00000418660 TMEM135Q86UB9 458 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 TRIM73Q86UV7 250 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 CILP2Q8IUL8 1156 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 PPIL6Q8IXY8 311 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 C19orf47Q8N9M1 422 aaKnown RBP15.91■□□□□ 0.14
LINC00404-201ENST00000418660 APOBEC4Q8WW27 367 aaKnown RBP15.91■□□□□ 0.14
LINC00404-201ENST00000418660 MR1Q95460 341 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 ZNF669Q96BR6 464 aaPredicted RBP15.91■□□□□ 0.14
LINC00404-201ENST00000418660 CLIP3Q96DZ5 547 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 TRIM56Q9BRZ2 755 aaKnown RBP15.91■□□□□ 0.14
LINC00404-201ENST00000418660 MENTQ9BUN1 341 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 FAM117AQ9C073 453 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 FAM60AQ9NP50 221 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 INTS10Q9NVR2 710 aaKnown RBP15.91■□□□□ 0.14
LINC00404-201ENST00000418660 TUBD1Q9UJT1 453 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 VPS9D1Q9Y2B5 631 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 CRYL1Q9Y2S2 319 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 MRFAP1Q9Y605 127 aa15.91■□□□□ 0.14
LINC00404-201ENST00000418660 USP27XA6NNY8 438 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 MEN1O00255 615 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 PLA2G2AP14555 144 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 CYP2A7P20853 494 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 CD9P21926 228 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 PEBP1P30086 187 aaKnown RBP15.9■□□□□ 0.14
LINC00404-201ENST00000418660 ITGA1P56199 1179 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 RPS15P62841 145 aaKnown RBP15.9■□□□□ 0.14
LINC00404-201ENST00000418660 NFATC3Q12968 1075 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 THOC5Q13769 683 aaKnown RBP15.9■□□□□ 0.14
LINC00404-201ENST00000418660 ERV3-1Q14264 604 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 PPP1R7Q15435 360 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 CENPUQ71F23 418 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 DSELQ8IZU8 1212 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 LINC01555Q8NAE3 123 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 SEC14L1Q92503 715 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 RAD51AP1Q96B01 352 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 SLC22A18Q96BI1 424 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 SIGLEC10Q96LC7 697 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 SLC25A18Q9H1K4 315 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 ACTL8Q9H568 366 aa15.9■□□□□ 0.14
LINC00404-201ENST00000418660 ACTR5Q9H9F9 607 aaPredicted RBP15.9■□□□□ 0.14
LINC00404-201ENST00000418660 KALRNO60229 2985 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 ZCWPW2A0A1B0GU75 182 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 E7EQ34 232 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 RASGRF2O14827 1237 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 NIPSNAP2O75323 286 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 USP1O94782 785 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 C1orf105O95561 183 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 S1PR4O95977 384 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 FURINP09958 794 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 PKMP14618 531 aaKnown RBP15.89■□□□□ 0.13
LINC00404-201ENST00000418660 CHRM3P20309 590 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 PTPN4P29074 926 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 RORAP35398 523 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 GABRA4P48169 554 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 GBX1Q14549 363 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 ZIC1Q15915 447 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 RNASEH2BQ5TBB1 312 aaKnown RBP15.89■□□□□ 0.13
LINC00404-201ENST00000418660 IZUMO3Q5VZ72 239 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 GPR135Q8IZ08 494 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 OR2L8Q8NGY9 312 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 SKA2Q8WVK7 121 aaPredicted RBP15.89■□□□□ 0.13
LINC00404-201ENST00000418660 N4BP2L2Q92802 583 aaPredicted RBP15.89■□□□□ 0.13
LINC00404-201ENST00000418660 SLCO2A1Q92959 643 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 FOPNLQ96NB1 174 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 IL17FQ96PD4 163 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 RUFY1Q96T51 708 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 RAB11FIP5Q9BXF6 653 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 DDX47Q9H0S4 455 aaKnown RBP15.89■□□□□ 0.13
LINC00404-201ENST00000418660 CHST8Q9H2A9 424 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 PCMTD2Q9NV79 361 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 IL1RAPL1Q9NZN1 696 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 CIDEBQ9UHD4 219 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 PCYOX1Q9UHG3 505 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 SLC39A10Q9ULF5 831 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 POLHQ9Y253 713 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 FARSAQ9Y285 508 aaKnown RBP15.89■□□□□ 0.13
LINC00404-201ENST00000418660 NFS1Q9Y697 457 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 MAD1L1Q9Y6D9 718 aa15.89■□□□□ 0.13
LINC00404-201ENST00000418660 CDC14CA4D256 554 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 CTAGE9A4FU28 777 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 ZNF749O43361 778 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 HBQ1P09105 142 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 RAB40ALP0C0E4 278 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 ATP5DP30049 168 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 CCNFP41002 786 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 GNG11P61952 73 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 PTK6Q13882 451 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 PAPD7Q5XG87 772 aaKnown RBP15.88■□□□□ 0.13
LINC00404-201ENST00000418660 ZNF470Q6ECI4 717 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 PCGF5Q86SE9 256 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 SYVN1Q86TM6 617 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 LMNTD2Q8IXW0 634 aa15.88■□□□□ 0.13
LINC00404-201ENST00000418660 AGGF1Q8N302 714 aaeCLIP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms