RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 DIRC2Q96SL1 478 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 SECISBP2Q96T21 854 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 CMKLR1Q99788 373 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 SMR3AQ99954 134 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 FOXC2Q99958 501 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 PSD2Q9BQI7 771 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 HEPHQ9BQS7 1158 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 ERP44Q9BS26 406 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 ADI1Q9BV57 179 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 TM6SF1Q9BZW5 370 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 CDT1Q9H211 546 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 LRMDAQ9H2I8 198 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 TMEM60Q9H2L4 133 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 PABPC3Q9H361 631 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 MCCC2Q9HCC0 563 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 ZFP64Q9NPA5 681 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 C8orf4Q9NR00 106 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 TXLNGQ9NUQ3 528 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 ETNK2Q9NVF9 386 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 TMLHEQ9NVH6 421 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 BARHL2Q9NY43 387 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 EHD2Q9NZN4 543 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 ANAPC5Q9UJX4 755 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 TLK1Q9UKI8 766 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 SCML1Q9UN30 329 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 ERVK-11Q9UQG0 969 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 B3GNT3Q9Y2A9 372 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 SLC27A6Q9Y2P4 619 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 ANGPTL3Q9Y5C1 460 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 JMJD1CQ15652 2540 aa5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 ARID1BQ8NFD5 2236 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-206ENST00000417628 COL6A5A8TX70 2615 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 FUOMA2VDF0 154 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF840PA6NDX5 716 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 C10orf142B7Z368 130 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF701M0R085 212 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 PMM2O15305 246 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 LATO43561 262 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 KRT86O43790 486 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 SCO2O43819 266 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 DTNBO60941 627 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 TSC22D2O75157 780 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 LY86O95711 162 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 F9P00740 461 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 LYNP07948 512 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 RPS17P08708 135 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 TCN2P20062 427 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 PCSK6P29122 969 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 GTF2H1P32780 548 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 UGT1A3P35503 534 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 CHKAP35790 457 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 KRT2P35908 639 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 NR2C2P49116 596 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ARFIP2P53365 341 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 RAD23BP54727 409 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 MFAP3P55082 362 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 NRG3P56975 720 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 SNX16P57768 344 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 NOP14P78316 857 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 TSPY1Q01534 308 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 RCN2Q14257 317 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 EIF4HQ15056 248 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 GEN1Q17RS7 908 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF630Q2M218 657 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 HIST2H2BDQ6DRA6 164 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 JMJD6Q6NYC1 403 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 KLHL35Q6PF15 583 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 KLHDC10Q6PID8 442 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 MPZL3Q6UWV2 235 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ANKS1BQ7Z6G8 1248 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 RALYLQ86SE5 291 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 SCN4BQ8IWT1 228 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 NKAIN3Q8N8D7 197 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 Q8NA96 180 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 PCYOX1LQ8NBM8 494 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF548Q8NEK5 533 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 GPR156Q8NFN8 814 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 CHPT1Q8WUD6 406 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 HOXB13Q92826 284 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ABTB1Q969K4 478 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 CIDECQ96AQ7 238 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 KLHL29Q96CT2 875 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 C19orf60Q96EN9 201 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 REXO5Q96IC2 774 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 METTL2AQ96IZ6 378 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ART5Q96L15 291 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 RANBP9Q96S59 729 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 CGRRF1Q99675 332 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 TSG101Q99816 390 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 NEURL2Q9BR09 285 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 CIPCQ9C0C6 399 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 DPH5Q9H2P9 285 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 GCM1Q9NP62 436 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 PLCB1Q9NQ66 1216 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 PIH1D1Q9NWS0 290 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 FBXL12Q9NXK8 326 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 IFNKQ9P0W0 207 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 SAE1Q9UBE0 346 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF212Q9UDV6 495 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 SERGEFQ9UGK8 458 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms