RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CCNFP41002 786 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 LY6DQ14210 128 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 KIR2DS3Q14952 304 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 TTLL9Q3SXZ7 439 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 C16orf46Q6P387 395 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 CENPUQ71F23 418 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 C19orf47Q8N9M1 422 aaKnown RBP10.84□□□□□ -0.67
RFFL-204ENST00000414419 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
RFFL-204ENST00000414419 STARD8Q92502 1023 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 EXTL1Q92935 676 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 RAD51AP1Q96B01 352 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 FAM136AQ96C01 138 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 ZNF501Q96CX3 271 aaPredicted RBP10.84□□□□□ -0.67
RFFL-204ENST00000414419 CLIP3Q96DZ5 547 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 TCTN2Q96GX1 697 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 CATSPER2Q96P56 530 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 OR2A14Q96R47 310 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 NAT9Q9BTE0 207 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 RAB11FIP5Q9BXF6 653 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.84□□□□□ -0.67
RFFL-204ENST00000414419 IL17BQ9UHF5 180 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 FAM169AQ9Y6X4 670 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 COL6A6A6NMZ7 2263 aa10.84□□□□□ -0.67
RFFL-204ENST00000414419 A0A0J9YY10 115 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 ZCWPW2A0A1B0GU75 182 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 E7EQ34 232 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 SMAPO00193 183 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 NKX2-8O15522 239 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 TIAF1O95411 115 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 TTC4O95801 387 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 S1PR4O95977 384 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 PRB1P04280 392 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 MSL3P1P0C860 447 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 PRKAR1AP10644 381 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 SFTPCP11686 197 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 CD9P21926 228 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 PKLRP30613 574 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 PTGIRP43119 386 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 MAGEA3P43357 314 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 CTBP1Q13363 440 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 MORF4L2Q15014 288 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 TBR1Q16650 682 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 KYNUQ16719 465 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 SLC5A12Q1EHB4 618 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 BBS9Q3SYG4 887 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 BORAQ6PGQ7 559 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 CNSTQ6PJW8 725 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 PCSK4Q6UW60 755 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 TRIM73Q86UV7 250 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 KCNMB4Q86W47 210 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 DENND6AQ8IWF6 608 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 GPR135Q8IZ08 494 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 PDIK1LQ8N165 341 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 C2orf73Q8N5S3 287 aaPredicted RBP10.83□□□□□ -0.68
RFFL-204ENST00000414419 ZBTB2Q8N680 514 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 MR1Q95460 341 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 MED8Q96G25 268 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 FAM167BQ9BTA0 163 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 FBXO6Q9NRD1 293 aaPredicted RBP10.83□□□□□ -0.68
RFFL-204ENST00000414419 LATS2Q9NRM7 1088 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 INTS7Q9NVH2 962 aaKnown RBP10.83□□□□□ -0.68
RFFL-204ENST00000414419 IRAK4Q9NWZ3 460 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 SPHK1Q9NYA1 384 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 CIDEBQ9UHD4 219 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
RFFL-204ENST00000414419 COMMD10Q9Y6G5 202 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 ATRXP46100 2492 aa10.83□□□□□ -0.68
RFFL-204ENST00000414419 CCDC88CQ9P219 2028 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 C21orf140B9A014 251 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 NDC80O14777 642 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 RASGRF2O14827 1237 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 C1orf105O95561 183 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 HBQ1P09105 142 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 TPBGLP0DKB5 382 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 CASQ1P31415 396 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 SLC1A2P43004 574 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 CCR10P46092 362 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 BDKRB1P46663 353 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 ITGA1P56199 1179 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 RPS15P62841 145 aaKnown RBP10.82□□□□□ -0.68
RFFL-204ENST00000414419 DHX9Q08211 1270 aaKnown RBP10.82□□□□□ -0.68
RFFL-204ENST00000414419 CDC20Q12834 499 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 DNASE1L3Q13609 305 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 ERV3-1Q14264 604 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 CRYMQ14894 314 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 SF1Q15637 639 aaKnown RBP10.82□□□□□ -0.68
RFFL-204ENST00000414419 HSP90AA5PQ58FG0 334 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 ZNF789Q5FWF6 425 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 SPANXN3Q5MJ09 141 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 CDHR3Q6ZTQ4 885 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 TAX1BP1Q86VP1 789 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 OR2L8Q8NGY9 312 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 OR1L3Q8NH93 324 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 CT55Q8WUE5 264 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 SEC14L1Q92503 715 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 SNF8Q96H20 258 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 KRT12Q99456 494 aa10.82□□□□□ -0.68
RFFL-204ENST00000414419 EBNA1BP2Q99848 306 aaKnown RBP10.82□□□□□ -0.68
RFFL-204ENST00000414419 GPR87Q9BY21 358 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms