RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FRMD6-AS1P0C7T7 363 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 EFNA1P20827 205 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 ITGA3P26006 1051 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 LIMK1P53667 647 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 MAT1AQ00266 395 aaKnown RBP3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 HYAL1Q12794 435 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 PTPRCAPQ14761 206 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 RASA2Q15283 850 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 CCDC6Q16204 474 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 KLHL26Q53HC5 615 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 PRR27Q6MZM9 219 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 CORO6Q6QEF8 472 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 ISCA2Q86U28 154 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 NUDT13Q86X67 352 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 APLFQ8IW19 511 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 XXYLT1Q8NBI6 393 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 OR1J1Q8NGS3 322 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 OR13J1Q8NGT2 312 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 OLIG1Q8TAK6 271 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 FAM76AQ8TAV0 307 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 CCDC107Q8WV48 283 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 TEKT4Q8WW24 435 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 IRGQQ8WZA9 623 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 NXNL1Q96CM4 212 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 SENP5Q96HI0 755 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 LRRC3BQ96PB8 259 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 DUX3Q96PT4 197 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 SEPHS2Q99611 448 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 RHNO1Q9BSD3 238 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 SERINC1Q9NRX5 453 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 ECHDC1Q9NTX5 307 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 TXLNGQ9NUQ3 528 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 FLRT3Q9NZU0 649 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 ZDHHC2Q9UIJ5 367 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 ZHX1Q9UKY1 873 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 MAPKBP1O60336 1514 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 DNMT1P26358 1616 aaKnown RBP3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 NUP153P49790 1475 aaKnown RBP3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 ERCC6Q03468 1493 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 A0A0G2JLW4 131 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 EDDM13A0A1B0GTR0 161 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 A8MXE2 369 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 ATP6V0E1O15342 81 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 CIDEAO60543 219 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 PRKRAO75569 313 aaKnown RBP3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 AMBPP02760 352 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 HSP90AA1P07900 732 aaKnown RBP3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 RAB40ALP0C0E4 278 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 CFC1BP0CG36 223 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 CFC1P0CG37 223 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 PRSS56P0CW18 603 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 MYBL1P10243 752 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 KRT20P35900 424 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 PDX1P52945 283 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 PRPF4BQ13523 1007 aaKnown RBP3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 RBM39Q14498 530 aaKnown RBP3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 VWC2Q2TAL6 325 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 KIAA1644Q3SXP7 199 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 ZNF628Q5EBL2 1059 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 TCP11X2Q5H9J9 407 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 ARHGAP17Q68EM7 881 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 MFSD6Q6ZSS7 791 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 KLHDC8BQ8IXV7 354 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 ARHGAP24Q8N264 748 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 NME8Q8N427 588 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 NPEPL1Q8NDH3 523 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 SSMEM1Q8WWF3 244 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 TMEM190Q8WZ59 177 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 NR4A3Q92570 626 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 ERP27Q96DN0 273 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 LGALS12Q96DT0 336 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 FBXO17Q96EF6 278 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 SFXN2Q96NB2 322 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 Q9N2K0 584 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 SPHK1Q9NYA1 384 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 ABT1Q9ULW3 272 aaKnown RBP3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 GAB2Q9UQC2 676 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 KIAA0586Q9BVV6 1533 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 KDM6BO15054 1643 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 PREX2Q70Z35 1606 aa3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 TCOF1Q13428 1488 aaKnown RBP3.47□□□□□ -1.85
HMGB1P11-201ENST00000413899 PCDH11YQ9BZA8 1340 aa3.46□□□□□ -1.85
HMGB1P11-201ENST00000413899 EPRSP07814 1512 aaKnown RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 IGLV9-49A0A0B4J1Y8 123 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 IGHV4-61A0A0C4DH41 118 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 LOC101059948A0A1B0GTJ6 334 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 GRID2O43424 1007 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 SPRY1O43609 319 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 TBX10O75333 385 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 C22orf31O95567 290 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 IGHV2-70P01814 119 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 IGHV4-59P01825 116 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 FYNP06241 537 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 PATE4P0C8F1 98 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CA4P22748 312 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 TCEA1P23193 301 aaKnown RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CA6P23280 308 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 EEF1DP29692 281 aaKnown RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 PCGF2P35227 344 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 PPP5CP53041 499 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms