RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DNAJC25-GNG10A0A024R161 153 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 CNTN5O94779 1100 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 DCAF12L1Q5VU92 463 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 PAOXQ6QHF9 649 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 ZNF347Q96SE7 839 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 HBEGFQ99075 208 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 DERL2Q9GZP9 239 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 EHD3Q9NZN3 535 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 PLK4O00444 970 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 CHRNGP07510 517 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 SEMA3AQ14563 771 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 HERC3Q15034 1050 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 ESAMQ96AP7 390 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 C12orf65Q9H3J6 166 aaKnown RBP16.93■□□□□ 0.3
PHRF1-202ENST00000413872 POPDC3Q9HBV1 291 aa16.93■□□□□ 0.3
PHRF1-202ENST00000413872 LCHNA4D1U4 455 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 OAZ2O95190 189 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 IL7RP16871 459 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 CASRP41180 1078 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 SUOXP51687 545 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 CYP4F3Q08477 520 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 KCNC3Q14003 757 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 LACTB2Q53H82 288 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-202ENST00000413872 ZNF366Q8N895 744 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 KLHDC7BQ96G42 594 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 ACSS2Q9NR19 701 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 NLE1Q9NVX2 485 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-202ENST00000413872 PHF11Q9UIL8 331 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 U3KQV3 271 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 CPED1A4D0V7 1026 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 PFKLP17858 780 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 ZNF805Q5CZA5 627 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 C10orf62Q5T681 223 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-202ENST00000413872 PQLC3Q8N755 202 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 RFKQ969G6 155 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 CENPNQ96H22 339 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-202ENST00000413872 MOCS1Q9NZB8 636 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 B4GALT6Q9UBX8 382 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 ACSL5Q9ULC5 683 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 C4BP0C0L5 1744 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 NPC1O15118 1278 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 GRIA1P42261 906 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 TRIM25Q14258 630 aaKnown RBP16.92■□□□□ 0.3
PHRF1-202ENST00000413872 GRM2Q14416 872 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 HKDC1Q2TB90 917 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 NIPAL1Q6NVV3 410 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 ERN2Q76MJ5 926 aaKnown RBP16.92■□□□□ 0.3
PHRF1-202ENST00000413872 OXR1Q8N573 874 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 TRPV3Q8NET8 790 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 PSKH2Q96QS6 385 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 SIRPGQ9P1W8 387 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 CDH7Q9ULB5 785 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 PCDHB11Q9Y5F2 797 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 SESN1Q9Y6P5 492 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 DCLK1O15075 740 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 BMPR1AP36894 532 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 LBX1P52954 281 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 SPATA7Q9P0W8 599 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 CKLFQ9UBR5 152 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 TMEM59LQ9UK28 342 aa16.92■□□□□ 0.3
PHRF1-202ENST00000413872 A8MT66 165 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 CAPN14A8MX76 684 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 GRK6P43250 576 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 MED22Q15528 200 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 TMEM44Q2T9K0 475 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 MRPL10Q7Z7H8 261 aaKnown RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 HCAR2Q8TDS4 363 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 GPR151Q8TDV0 419 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 KCNJ9Q92806 393 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 SMARCD2Q92925 531 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 NSMCE3Q96MG7 304 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 GMEB2Q9UKD1 530 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 TEX264Q9Y6I9 313 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 CLCA3PQ9Y6N3 262 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 DGKBQ9Y6T7 804 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 CXCR6O00574 342 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 TEX28O15482 410 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 GRID2O43424 1007 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 CCNB2O95067 398 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 CTSOP43234 321 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 CCR10P46092 362 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 NCBP2P52298 156 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■□□□□ 9.6
PHRF1-202ENST00000413872 CCDC92Q53HC0 331 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 GPRC6AQ5T6X5 926 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 CROCCP3Q8IVE0 287 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ANKLE1Q8NAG6 615 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 TMEM145Q8NBT3 493 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 FAM13CQ8NE31 585 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 OR10A6Q8NH74 314 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 GIPC3Q8TF64 312 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ZBED3Q96IU2 234 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 NDC1Q9BTX1 674 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 MAGEE1Q9HCI5 957 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ARHGEF3Q9NR81 526 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ZCCHC3Q9NUD5 404 aaKnown RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 MRPL39Q9NYK5 338 aaKnown RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 KLHL33A6NCF5 533 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 PGLSO95336 258 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ALOX5P09917 674 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms