RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 CAB39LQ9H9S4 337 aa7.48□□□□□ -1.21
CPSF4-202ENST00000412686 POLR1BQ9H9Y6 1135 aa7.48□□□□□ -1.21
CPSF4-202ENST00000412686 APMAPQ9HDC9 416 aa7.48□□□□□ -1.21
CPSF4-202ENST00000412686 ACTR10Q9NZ32 417 aa7.48□□□□□ -1.21
CPSF4-202ENST00000412686 FOXJ2Q9P0K8 574 aa7.48□□□□□ -1.21
CPSF4-202ENST00000412686 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPSF4-202ENST00000412686 TRMT6Q9UJA5 497 aaKnown RBP7.48□□□□□ -1.21
CPSF4-202ENST00000412686 ADAMTS6Q9UKP5 1117 aa7.48□□□□□ -1.21
CPSF4-202ENST00000412686 MTO1Q9Y2Z2 717 aaKnown RBP7.48□□□□□ -1.21
CPSF4-202ENST00000412686 VWA7Q9Y334 891 aa7.48□□□□□ -1.21
CPSF4-202ENST00000412686 COMMD10Q9Y6G5 202 aa7.48□□□□□ -1.21
CPSF4-202ENST00000412686 V9GYY5 206 aaPredicted RBP7.48□□□□□ -1.21
CPSF4-202ENST00000412686 HGSO14964 777 aaPredicted RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PHGDHO43175 533 aaKnown RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PSIP1O75475 530 aaKnown RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 TSPAN12O95859 305 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 CHRM5P08912 532 aaPredicted RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 ST6GAL1P15907 406 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 UGT2B7P16662 529 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 CD9P21926 228 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PSMB5P28074 263 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PRDX3P30048 256 aaKnown RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 ATP5DP30049 168 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 STX2P32856 288 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 CSTF2P33240 577 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 SHMT2P34897 504 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 YBX1P67809 324 aaKnown RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 TRA2AQ13595 282 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 BMPR2Q13873 1038 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 TTLL9Q3SXZ7 439 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 ANKS6Q68DC2 871 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 FAM45BPQ6NSW5 357 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 ARMC6Q6NXE6 501 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 MBOAT1Q6ZNC8 495 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PRSS42Q7Z5A4 293 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PACS2Q86VP3 889 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 RASGRP3Q8IV61 690 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 IFT20Q8IY31 132 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PPFIBP2Q8ND30 876 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 AGBL5Q8NDL9 886 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 GABPB2Q8TAK5 448 aaPredicted RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 FAM45AQ8TCE6 357 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 DENND1AQ8TEH3 1009 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 EEF1AKMT1Q8WVE0 214 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 ANKRD49Q8WVL7 239 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 CDKL2Q92772 493 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 DLG3Q92796 817 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 USP7Q93009 1102 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 GRAMD1AQ96CP6 724 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 LINGO1Q96FE5 620 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 NAF1Q96HR8 494 aaKnown RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 SLC46A1Q96NT5 459 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 OR2A14Q96R47 310 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PKP4Q99569 1192 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 RBBP8Q99708 897 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 RAB33BQ9H082 229 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 RHOJQ9H4E5 214 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 ZNF768Q9H5H4 540 aaKnown RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 ANKZF1Q9H8Y5 726 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 SIDT1Q9NXL6 827 aaKnown RBP7.47□□□□□ -1.21
CPSF4-202ENST00000412686 TAS2R13Q9NYV9 303 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 EPHA6Q9UF33 1036 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 POMT2Q9UKY4 750 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 SLC39A10Q9ULF5 831 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 KLHL20Q9Y2M5 609 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 PCDHGA8Q9Y5G5 932 aa7.47□□□□□ -1.21
CPSF4-202ENST00000412686 SNRNP200O75643 2136 aaKnown RBP7.46□□□□□ -1.21
CPSF4-202ENST00000412686 PIPSLA2A3N6 862 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 TLCD2A6NGC4 264 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 SLC9B1P1A6NJY1 282 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 CDRT15L2A8MXV6 281 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 C2orf74A8MZ97 194 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 ISM1B1AKI9 464 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 TMX2-CTNND1H3BSU7 103 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 RASGRF2O14827 1237 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 HCRTR1O43613 425 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 NRP2O60462 931 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 DXOO77932 396 aaKnown RBP7.46□□□□□ -1.22
CPSF4-202ENST00000412686 WISP3O95389 354 aaPredicted RBP7.46□□□□□ -1.22
CPSF4-202ENST00000412686 SYF2O95926 243 aaKnown RBP7.46□□□□□ -1.22
CPSF4-202ENST00000412686 ITGA2BP08514 1039 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 GSTA2P09210 222 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 ANKRD34CP0C6C1 535 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 EBLN1P0CF75 366 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 MPC1LP0DKB6 136 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 FOLR1P15328 257 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 ZNF37AP17032 561 aaPredicted RBP7.46□□□□□ -1.22
CPSF4-202ENST00000412686 CDH3P22223 829 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 RBMS1P29558 406 aaKnown RBP7.46□□□□□ -1.22
CPSF4-202ENST00000412686 SLC5A2P31639 672 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 GP5P40197 560 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 RAB28P51157 221 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 FOXM1Q08050 763 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 PRKAA1Q13131 559 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 SRSF6Q13247 344 aaKnown RBP7.46□□□□□ -1.22
CPSF4-202ENST00000412686 EIF3IQ13347 325 aaKnown RBP7.46□□□□□ -1.22
CPSF4-202ENST00000412686 UAP1Q16222 522 aaPredicted RBP7.46□□□□□ -1.22
CPSF4-202ENST00000412686 PHKG1Q16816 387 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 DEFB110Q30KQ9 67 aa7.46□□□□□ -1.22
CPSF4-202ENST00000412686 TBC1D25Q3MII6 688 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms