RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 PARK7Q99497 189 aaKnown RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 GTPBP2Q9BX10 602 aaKnown RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 MMADHCQ9H3L0 296 aaPredicted RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 TRPC7Q9HCX4 862 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 GKN1Q9NS71 199 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF701Q9NV72 531 aaPredicted RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 COQ3Q9NZJ6 369 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 VPS18Q9P253 973 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 PCDH11YQ9BZA8 1340 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 TRIP12Q14669 1992 aaPredicted RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 A0A1W2PPK0 400 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 A0A1W2PRB8 838 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TRIM64A6NGJ6 449 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TRIM64BA6NI03 449 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 DUXAA6NLW8 204 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 YDJCA8MPS7 323 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 SLC33A1O00400 549 aaPredicted RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 GAPDHSO14556 408 aaPredicted RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF263O14978 683 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 PGLSO95336 258 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 RLN1P04808 185 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 SPP1P10451 314 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 ACP2P11117 423 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 CDK4P11802 303 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 CDH1P12830 882 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 CKMT2P17540 419 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 HSD17B3P37058 310 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 RGS7P49802 495 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 GMPSP49915 693 aaPredicted RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 MFAP3P55082 362 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 CLDN15P56746 228 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 RPS18P62269 152 aaKnown RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 ASIC1P78348 528 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 CX3CL1P78423 397 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 RPL24P83731 157 aaKnown RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 LTBQ06643 244 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TNK1Q13470 666 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF260Q3ZCT1 412 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 LRRC73Q5JTD7 316 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 AWAT2Q6E213 333 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 C11orf63Q6NUN7 778 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 SLC27A1Q6PCB7 646 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 GBP6Q6ZN66 633 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TMEM182Q6ZP80 229 aaPredicted RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 PIWIL4Q7Z3Z4 852 aaKnown RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 ARHGAP22Q7Z5H3 698 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 PHLDB2Q86SQ0 1253 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 CRYBG2Q8N1P7 616 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 CARNMT1Q8N4J0 409 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 NPEPL1Q8NDH3 523 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 OR13J1Q8NGT2 312 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 VANGL1Q8TAA9 524 aaPredicted RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TEKT1Q969V4 418 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 ST6GALNAC6Q969X2 333 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 MYADMQ96S97 322 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 UTP14AQ9BVJ6 771 aaKnown RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TM6SF1Q9BZW5 370 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TMEM206Q9H813 350 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 DNAJC4Q9NNZ3 241 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TCF7L2Q9NQB0 619 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 OLFML3Q9NRN5 406 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 SPHK1Q9NYA1 384 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TXNDC16Q9P2K2 825 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 POU2F3Q9UKI9 436 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 RALYQ9UKM9 306 aaKnown RBP3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 MTUS1Q9ULD2 1270 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 TRIM17Q9Y577 477 aa3.82□□□□□ -1.8
RNU2-28P-201ENST00000410457 A0A1W2PPI3 338 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 LRRD1A4D1F6 860 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 ASPDHA6ND91 283 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 SMTNL1A8MU46 457 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 E9PI62 339 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 SYNGR3O43761 229 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 FCGR3BO75015 233 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 C9P02748 559 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 SMIM18P0DKX4 95 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 MYL6BP14649 208 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 IL15P40933 162 aaPredicted RBP3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 RPL21P46778 160 aaKnown RBP3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 THOP1P52888 689 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 PDX1P52945 283 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 SNU13P55769 128 aaKnown RBP3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 STX1BP61266 288 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 UBXN1Q04323 297 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 KIR2DS3Q14952 304 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 CA9Q16790 459 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 C2orf76Q3KRA6 126 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 MCMDC2Q4G0Z9 681 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF789Q5FWF6 425 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 IRAK1BP1Q5VVH5 260 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF575Q86XF7 245 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 SPATA2LQ8IUW3 424 aaPredicted RBP3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 CFAP206Q8IYR0 622 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 ANKRD13CQ8N6S4 541 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 BMPERQ8N8U9 685 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 THAP8Q8NA92 274 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 SPC24Q8NBT2 197 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms