RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 RYKP34925 604 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 CAPGP40121 348 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 PIK3CBP42338 1070 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 CRISP3P54108 245 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 CYP4F3Q08477 520 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 SP140Q13342 867 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 C14orf80Q86SX3 495 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 KBTBD6Q86V97 674 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 GKN2Q86XP6 184 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 FAM47BQ8NA70 645 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 TMEM145Q8NBT3 493 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 HM13Q8TCT9 377 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 CENPNQ96H22 339 aaPredicted RBP8.9□□□□□ -0.98
PBRM1-208ENST00000410007 PSKH2Q96QS6 385 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 SMG9Q9H0W8 520 aaKnown RBP8.9□□□□□ -0.98
PBRM1-208ENST00000410007 ZCCHC3Q9NUD5 404 aaKnown RBP8.9□□□□□ -0.98
PBRM1-208ENST00000410007 SIRPGQ9P1W8 387 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 RAPGEFL1Q9UHV5 662 aa8.9□□□□□ -0.98
PBRM1-208ENST00000410007 CPED1A4D0V7 1026 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 MYADML2A6NDP7 307 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 CXCR6O00574 342 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 GJB5O95377 273 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 CHRNGP07510 517 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 AGXTP21549 392 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 EIF4HQ15056 248 aaKnown RBP8.9□□□□□ -0.99
PBRM1-208ENST00000410007 GPRC6AQ5T6X5 926 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 ZBED3Q96IU2 234 aaPredicted RBP8.9□□□□□ -0.99
PBRM1-208ENST00000410007 NSMCE3Q96MG7 304 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 HERC2P3Q9BVR0 1158 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 SLC2A11Q9BYW1 496 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 DERL2Q9GZP9 239 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 ADAP2Q9NPF8 381 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 DNAAF2Q9NVR5 837 aaKnown RBP8.9□□□□□ -0.99
PBRM1-208ENST00000410007 GALNT8Q9NY28 637 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 SLC2A6Q9UGQ3 507 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 NUP188Q5SRE5 1749 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 AGPSO00116 658 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 MPZL2O60487 215 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 OAZ2O95190 189 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 CCKBRP32239 447 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 SEMA3AQ14563 771 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 FAM180AQ6UWF9 173 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 DCUN1D3Q8IWE4 304 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 SLC34A3Q8N130 599 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 OR10T2Q8NGX3 314 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 GPR151Q8TDV0 419 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 LRRC15Q8TF66 581 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 PEX13Q92968 403 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 CIB1Q99828 191 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 NLE1Q9NVX2 485 aaPredicted RBP8.9□□□□□ -0.99
PBRM1-208ENST00000410007 ZNF358Q9NW07 568 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 ERVK-11Q9UQG0 969 aa8.9□□□□□ -0.99
PBRM1-208ENST00000410007 MYH2Q9UKX2 1941 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 ZNF840PA6NDX5 716 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 BCKDKO14874 412 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 SHOX2O60902 331 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 SEC24AO95486 1093 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 AGR2O95994 175 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 THRBP10828 461 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 DBTP11182 482 aaKnown RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CREB1P16220 341 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 HOXA11P31270 313 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 MLLT3P42568 568 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CTSOP43234 321 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 NCBP2P52298 156 aaKnown RBP eCLIP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 LBX1P52954 281 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 TRIM32Q13049 653 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 ATP1A4Q13733 1029 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 HERC3Q15034 1050 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 NAPRTQ6XQN6 538 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 THAP5Q7Z6K1 395 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CILP2Q8IUL8 1156 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 SVOPLQ8N434 492 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 GIPC3Q8TF64 312 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 KCNJ9Q92806 393 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 NECTIN4Q96NY8 510 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CLEC4MQ9H2X3 399 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 SMPD3Q9NY59 655 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 MRPS7Q9Y2R9 242 aaKnown RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CXorf49A8MYA2 514 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 DCLK1O15075 740 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 MAGEB3O15480 346 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 TEX28O15482 410 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 GRID2O43424 1007 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CHST10O43529 356 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CNMDO75829 334 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CCNB2O95067 398 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 PGLSO95336 258 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 SIX3O95343 332 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 PGM3O95394 542 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 GSRP00390 522 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 PIM1P11309 404 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 HLA-EP13747 358 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 CCR10P46092 362 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 RHAGQ02094 409 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 RIPK1Q13546 671 aa8.89□□□□□ -0.99
PBRM1-208ENST00000410007 SIM2Q14190 667 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-208ENST00000410007 ZNF805Q5CZA5 627 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms