RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 COL6A2P12110 1019 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 PRAMEF13Q5VWM6 474 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 SULT1C3Q6IMI6 304 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 HORMAD1Q86X24 394 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 TDRPQ86YL5 185 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 REPS1Q96D71 796 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 TGM7Q96PF1 710 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 OXSMQ9NWU1 459 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 AKAP7Q9P0M2 348 aaPredicted RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 ATXN10Q9UBB4 475 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 STOML1Q9UBI4 398 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 MAFFQ9ULX9 164 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 MAP4K5Q9Y4K4 846 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 U3KQV3 271 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 OR6C74A6NCV1 312 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 CXCR2P25025 360 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 RYKP34925 604 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 MAPK12P53778 367 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 ITIH4Q14624 930 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 KPNB1Q14974 876 aaKnown RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 ZCCHC8Q6NZY4 707 aaKnown RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 MED27Q6P2C8 311 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 HMGN2P46Q86SG4 172 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 THOC6Q86W42 341 aaKnown RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 LIX1Q8N485 282 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 PLA2G15Q8NCC3 412 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 OR5AK3PQ8NH89 298 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 SLC9A6Q92581 669 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 WDR92Q96MX6 357 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 OR2M4Q96R27 311 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 CNPPD1Q9BV87 410 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 NLNQ9BYT8 704 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 ADNPQ9H2P0 1102 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 TBC1D17Q9HA65 648 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 PRKAG3Q9UGI9 489 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 OR10H1Q9Y4A9 318 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 CACNA1IQ9P0X4 2223 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 RANBP2P49792 3224 aaKnown RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 NUP214P35658 2090 aaPredicted RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 GREB1LQ9C091 1923 aaPredicted RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 KMOO15229 486 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 DNAJC8O75937 253 aaPredicted RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 KLK1P06870 262 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 STX4Q12846 297 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 PCLAFQ15004 111 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 FAM174BQ3ZCQ3 159 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 SCML4Q8N228 414 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 FBXO15Q8NCQ5 510 aaPredicted RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 KCNJ9Q92806 393 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 ZNF514Q96K75 400 aaPredicted RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 PPP3R2Q96LZ3 170 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 CEP295NLQ96MC4 621 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 DPYSL5Q9BPU6 564 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 TBC1D10AQ9BXI6 508 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 TRIM39Q9HCM9 518 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 NUDT4Q9NZJ9 180 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 FAF1Q9UNN5 650 aaPredicted RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 DHRS7Q9Y394 339 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 ZNF839A8K0R7 811 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 STX16-NPEPL1H3BU86 382 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 B4GALT2O60909 372 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 SLC22A3O75751 556 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 GABRB3P28472 473 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 LEPRP48357 1165 aaKnown RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 RPL26P61254 145 aaKnown RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 RGS1Q08116 209 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 KLF10Q13118 480 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 RALGPS1Q5JS13 557 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 FAM219BQ5XKK7 198 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 HLA-DQA1Q5Y7H0 255 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 FAM92BQ6ZTR7 304 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 SLC22A15Q8IZD6 547 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 C1orf52Q8N6N3 182 aaKnown RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 TMCO5AQ8N6Q1 288 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 FAM110BQ8TC76 370 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 RTP4Q96DX8 246 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 SLC30A3Q99726 388 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 RPL26L1Q9UNX3 145 aaKnown RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 FOCADQ5VW36 1801 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 POM121BA6NF01 834 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 PI15O43692 258 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 SGTAO43765 313 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 SHOX2O60902 331 aaPredicted RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 IGLV3-25P01717 112 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 PTPN4P29074 926 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 CMPK1P30085 196 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 MAGEA9P43362 315 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 YAP1P46937 504 aaKnown RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 NCALDP61601 193 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 HERVK_113P63132 956 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 PPP1R8Q12972 351 aaKnown RBP11.12□□□□□ -0.63
SNX13-202ENST00000409604 DENND5AQ6IQ26 1287 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 CLNKQ7Z7G1 428 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 KIRREL3Q8IZU9 778 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 KCNN1Q92952 543 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 PPCDCQ96CD2 204 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 SLC25A23Q9BV35 468 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 TMEM109Q9BVC6 243 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 ERVK-6Q9BXR3 956 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms