RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ITGA11Q9UKX5 1188 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 PADI2Q9Y2J8 665 aa4.57□□□□□ -1.68
HMGB3P18-201ENST00000406327 AGLP35573 1532 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 NEXMIFQ5QGS0 1516 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ANKRD36BQ8N2N9 1353 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 NINLQ9Y2I6 1382 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 SLC33A1O00400 549 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 FAM58BPP0C7Q3 252 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 STMN1P16949 149 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 LMO1P25800 156 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 CORO1AP31146 461 aaKnown RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 SLC6A6P31641 620 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ATP6V1E1P36543 226 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 LHX1P48742 406 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 STX1BP61266 288 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 SEC61A1P61619 476 aaKnown RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ABATP80404 500 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 CUL3Q13618 768 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ODF3L2Q3SX64 289 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 CCDC92Q53HC0 331 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ASPRV1Q53RT3 343 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 MEPCEQ7L2J0 689 aaKnown RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ATG9AQ7Z3C6 839 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ADHFE1Q8IWW8 467 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 TUSC5Q8IXB3 177 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 OR52I2Q8NH67 350 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 TANKQ92844 425 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 PTP4A1Q93096 173 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 CDCA5Q96FF9 252 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 OTUB1Q96FW1 271 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 HMCESQ96FZ2 354 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 CFAP53Q96M91 514 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF582Q96NG8 517 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 CPNE1Q99829 537 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 BTBD10Q9BSF8 475 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 UTP14AQ9BVJ6 771 aaKnown RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 GTPBP2Q9BX10 602 aaKnown RBP4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 EBF3Q9H4W6 596 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 TCP11L1Q9NUJ3 509 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 MIOSQ9NXC5 875 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 ELOVL5Q9NYP7 299 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 COQ3Q9NZJ6 369 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 RHCGQ9UBD6 479 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 CACNG4Q9UBN1 327 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 MROH2AA6NES4 1674 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 PIK3C2BO00750 1634 aa4.56□□□□□ -1.68
HMGB3P18-201ENST00000406327 NSD2O96028 1365 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 CAMSAP1Q5T5Y3 1602 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 MYO3AQ8NEV4 1616 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 A4D1N5 150 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 TMEM221A6NGB7 291 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 PROB1E7EW31 1015 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 TMEM178BH3BS89 294 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 PGLSO95336 258 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 RLN1P04808 185 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 PLA2G4BP0C869 781 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 FAM106CPP0CH98 169 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 THEGLP0DJG4 465 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 GNAZP19086 355 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 HLA-DPA1P20036 260 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 PTPN3P26045 913 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 SSTR2P30874 369 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 HSD17B3P37058 310 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 TNNT2P45379 298 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 SNU13P55769 128 aaKnown RBP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 HNRNPKP61978 463 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 EEF1A2Q05639 463 aaKnown RBP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 TEFQ10587 303 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 PPP2R5CQ13362 524 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 KLF9Q13886 244 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 ETFDHQ16134 617 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 LRRC73Q5JTD7 316 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 TCTE1Q5JU00 501 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 C20orf194Q5TEA3 1177 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 TECPR1Q7Z6L1 1165 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 DNAJC10Q8IXB1 793 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF34Q8IZ26 560 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 SYCP3Q8IZU3 236 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 CARNMT1Q8N4J0 409 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 NRACQ8N912 160 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 NHLRC2Q8NBF2 726 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 SYN2Q92777 582 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 TEKT1Q969V4 418 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 MIB2Q96AX9 1013 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF385AQ96PM9 386 aaKnown RBP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 KATNB1Q9BVA0 655 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 CDK19Q9BWU1 502 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 SPRTNQ9H040 489 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 TUFT1Q9NNX1 390 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 NPAP1Q9NZP6 1156 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 VDAC3Q9Y277 283 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 KCNK7Q9Y2U2 307 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 RICTORQ6R327 1708 aa4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 YTHDC2Q9H6S0 1430 aaKnown RBP4.55□□□□□ -1.68
HMGB3P18-201ENST00000406327 RIMBP3CA6NJZ7 1639 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 RIMBP3BA6NNM3 1639 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 RIMBP3Q9UFD9 1639 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 DIP2BQ9P265 1576 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 REREQ9P2R6 1566 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 KIF1BO60333 1816 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms