RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 NOS3P29474 1203 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 PLA2G16P53816 162 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 ARSFP54793 590 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 MEF2AQ02078 507 aaPredicted RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 PDZK1Q5T2W1 519 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 MFSD4BQ5TF39 518 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 CES4AQ5XG92 561 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 CAPN13Q6MZZ7 669 aaPredicted RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 TRIM40Q6P9F5 258 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 FAM124AQ86V42 546 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 ARMC8Q8IUR7 673 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 LSMEM2Q8N112 164 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 C1orf52Q8N6N3 182 aaKnown RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 LEMD2Q8NC56 503 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 PLD4Q96BZ4 506 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 RIOK2Q9BVS4 552 aaKnown RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 MARCH7Q9H992 704 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 FARSBQ9NSD9 589 aaKnown RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 UBAP1Q9NZ09 502 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 SLCO3A1Q9UIG8 710 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 PABPC1P11940 636 aaKnown RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 BLVRAP53004 296 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 MRPL28Q13084 256 aaKnown RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 RFTN2Q52LD8 501 aaPredicted RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 ARSIQ5FYB1 569 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 P2RY8Q86VZ1 359 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 LILRA2Q8N149 483 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 TMEM199Q8N511 208 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 ART5Q96L15 291 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 CMTM6Q9NX76 183 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 MRPS7Q9Y2R9 242 aaKnown RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 ASNA1O43681 348 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 MYL12AP19105 171 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 SDE2Q6IQ49 451 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 FAM180BQ6P0A1 224 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 ERI1Q8IV48 349 aaKnown RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 OR4K1Q8NGD4 311 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 CXorf40AQ8TE69 158 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 FUBP1Q96AE4 644 aaKnown RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 ZNF599Q96NL3 588 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 DUSP26Q9BV47 211 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 OR2AG1Q9H205 316 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 CCM2LQ9NUG4 571 aaPredicted RBP13.4□□□□□ -0.26
GSE1-203ENST00000405402 Q9Y3F1 56 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 GPSM3Q9Y4H4 160 aa13.4□□□□□ -0.26
GSE1-203ENST00000405402 MAGEB3O15480 346 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 ATG13O75143 517 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 CREG1O75629 220 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 EPOP01588 193 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 ACADVLP49748 655 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 ERVPABLB-1P60509 514 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 KCNAB2Q13303 367 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 NPTX1Q15818 432 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 KDELC1Q6UW63 502 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 TMC5Q6UXY8 1006 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 C11orf65Q8NCR3 313 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 PHC3Q8NDX5 983 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 IL4I1Q96RQ9 567 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 RPF2Q9H7B2 306 aaKnown RBP13.39□□□□□ -0.27
GSE1-203ENST00000405402 ZIM2Q9NZV7 527 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 FEN1P39748 380 aaKnown RBP13.39□□□□□ -0.27
GSE1-203ENST00000405402 OR1E2P47887 323 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 PCBP2Q15366 365 aaKnown RBP eCLIP13.39□□□□□ -0.272e-7■■■■■ 38
GSE1-203ENST00000405402 FAM171BQ6P995 826 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 BLOC1S3Q6QNY0 202 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 SUSD1Q6UWL2 747 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 ALKAL1Q6UXT8 129 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 OR2AP1Q8NGE2 309 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 ZNF461Q8TAF7 563 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 HM13Q8TCT9 377 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 NUDT8Q8WV74 236 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 KCNJ9Q92806 393 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 ABCB9Q9NP78 766 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 BTBD3Q9Y2F9 522 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 PIPSLA2A3N6 862 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 INPPL1O15357 1258 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 TSPAN33Q86UF1 283 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
GSE1-203ENST00000405402 CNIH3Q8TBE1 160 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 SORCS1Q8WY21 1168 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 KLHL28Q9NXS3 571 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 AASSQ9UDR5 926 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 GTF2A1LQ9UNN4 478 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 USP3Q9Y6I4 520 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 ISM1B1AKI9 464 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 XYLBO75191 536 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 SSR2P43308 183 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 MYBPC1Q00872 1141 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 FRG2Q64ET8 278 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 ZNF554Q86TJ5 538 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 KRT78Q8N1N4 520 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 FAR1Q8WVX9 515 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 PIH1D2Q8WWB5 315 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 MYLIPQ8WY64 445 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 MYDGFQ969H8 173 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 FRG2BQ96QU4 278 aa13.39□□□□□ -0.27
GSE1-203ENST00000405402 SLC32A1Q9H598 525 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms